RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 MAGEB2O15479 319 aa27.27■■□□□ 1.96
USP44-205ENST00000549639 CD52P31358 61 aa27.27■■□□□ 1.96
USP44-205ENST00000549639 AK2P54819 239 aa27.27■■□□□ 1.96
USP44-205ENST00000549639 TMEM62Q0P6H9 643 aa27.27■■□□□ 1.96
USP44-205ENST00000549639 PAK2Q13177 524 aa27.27■■□□□ 1.96
USP44-205ENST00000549639 KIAA0319LQ8IZA0 1049 aa27.27■■□□□ 1.96
USP44-205ENST00000549639 ZNF710Q8N1W2 664 aa27.27■■□□□ 1.96
USP44-205ENST00000549639 GDPD5Q8WTR4 605 aa27.27■■□□□ 1.96
USP44-205ENST00000549639 MBOAT7Q96N66 472 aa27.27■■□□□ 1.96
USP44-205ENST00000549639 AIFM3Q96NN9 605 aa27.27■■□□□ 1.96
USP44-205ENST00000549639 NRBP2Q9NSY0 501 aa27.27■■□□□ 1.96
USP44-205ENST00000549639 PADI3Q9ULW8 664 aa27.27■■□□□ 1.96
USP44-205ENST00000549639 COG5Q9UP83 839 aa27.27■■□□□ 1.96
USP44-205ENST00000549639 SKIV2LQ15477 1246 aaKnown RBP27.26■■□□□ 1.95
USP44-205ENST00000549639 C17orf80Q9BSJ5 609 aa27.26■■□□□ 1.95
USP44-205ENST00000549639 COL4A4P53420 1690 aaPredicted RBP27.25■■□□□ 1.95
USP44-205ENST00000549639 PSMD10O75832 226 aa27.25■■□□□ 1.95
USP44-205ENST00000549639 C22orf31O95567 290 aa27.25■■□□□ 1.95
USP44-205ENST00000549639 RWDD3Q9Y3V2 267 aa27.25■■□□□ 1.95
USP44-205ENST00000549639 CCDC194A0A1B0GVG4 234 aa27.24■■□□□ 1.95
USP44-205ENST00000549639 EPC2Q52LR7 807 aa27.24■■□□□ 1.95
USP44-205ENST00000549639 KRT40Q6A162 431 aa27.24■■□□□ 1.95
USP44-205ENST00000549639 FIBCD1Q8N539 461 aa27.24■■□□□ 1.95
USP44-205ENST00000549639 IL27Q8NEV9 243 aa27.24■■□□□ 1.95
USP44-205ENST00000549639 NAP1L4Q99733 375 aaKnown RBP27.24■■□□□ 1.95
USP44-205ENST00000549639 RNF216Q9NWF9 866 aaPredicted RBP27.24■■□□□ 1.95
USP44-205ENST00000549639 KCNJ14Q9UNX9 436 aa27.24■■□□□ 1.95
USP44-205ENST00000549639 TTC3P53804 2025 aa27.24■■□□□ 1.95
USP44-205ENST00000549639 RBAK-RBAKDNI3L0D1 243 aa27.23■■□□□ 1.95
USP44-205ENST00000549639 TDP2O95551 362 aa27.23■■□□□ 1.95
USP44-205ENST00000549639 OATP04181 439 aa27.23■■□□□ 1.95
USP44-205ENST00000549639 GCFC2P16383 781 aaKnown RBP27.23■■□□□ 1.95
USP44-205ENST00000549639 TMOD1P28289 359 aa27.23■■□□□ 1.95
USP44-205ENST00000549639 PTPROQ16827 1216 aa27.23■■□□□ 1.95
USP44-205ENST00000549639 TMEM192Q8IY95 271 aa27.23■■□□□ 1.95
USP44-205ENST00000549639 UNC45AQ9H3U1 944 aa27.23■■□□□ 1.95
USP44-205ENST00000549639 ORC3Q9UBD5 711 aaPredicted RBP27.23■■□□□ 1.95
USP44-205ENST00000549639 DDX25Q9UHL0 483 aaKnown RBP27.23■■□□□ 1.95
USP44-205ENST00000549639 ADGRA3Q8IWK6 1321 aa27.22■■□□□ 1.95
USP44-205ENST00000549639 H3BNC9 293 aa27.22■■□□□ 1.95
USP44-205ENST00000549639 CHMP2AO43633 222 aa27.22■■□□□ 1.95
USP44-205ENST00000549639 RPS6KA5O75582 802 aa27.22■■□□□ 1.95
USP44-205ENST00000549639 STAG3L1P0CL83 205 aa27.22■■□□□ 1.95
USP44-205ENST00000549639 CRYBB1P53674 252 aaPredicted RBP27.22■■□□□ 1.95
USP44-205ENST00000549639 INF2Q27J81 1249 aa27.22■■□□□ 1.95
USP44-205ENST00000549639 PPP4R3AQ6IN85 833 aa27.22■■□□□ 1.95
USP44-205ENST00000549639 MIER3Q7Z3K6 550 aa27.22■■□□□ 1.95
USP44-205ENST00000549639 NPAS4Q8IUM7 802 aa27.22■■□□□ 1.95
USP44-205ENST00000549639 METTL13Q8N6R0 699 aa27.22■■□□□ 1.95
USP44-205ENST00000549639 ETNPPLQ8TBG4 499 aa27.22■■□□□ 1.95
USP44-205ENST00000549639 RC3H2Q9HBD1 1191 aaKnown RBP27.22■■□□□ 1.95
USP44-205ENST00000549639 TTC28Q96AY4 2481 aa27.22■■□□□ 1.95
USP44-205ENST00000549639 GPR182O15218 404 aa27.21■■□□□ 1.95
USP44-205ENST00000549639 CTDNEP1O95476 244 aa27.21■■□□□ 1.95
USP44-205ENST00000549639 RB1P06400 928 aa27.21■■□□□ 1.95
USP44-205ENST00000549639 NEK4P51957 841 aa27.21■■□□□ 1.95
USP44-205ENST00000549639 B3GNT9Q6UX72 402 aa27.21■■□□□ 1.95
USP44-205ENST00000549639 NEK8Q86SG6 692 aa27.21■■□□□ 1.95
USP44-205ENST00000549639 RTN4RL1Q86UN2 441 aaPredicted RBP27.21■■□□□ 1.95
USP44-205ENST00000549639 HLA-CQ95604 372 aa27.21■■□□□ 1.95
USP44-205ENST00000549639 GTF3C6Q969F1 213 aa27.21■■□□□ 1.95
USP44-205ENST00000549639 ZNF689Q96CS4 500 aaPredicted RBP27.21■■□□□ 1.95
USP44-205ENST00000549639 MAP7D2Q96T17 732 aa27.21■■□□□ 1.95
USP44-205ENST00000549639 GINS2Q9Y248 185 aa27.21■■□□□ 1.95
USP44-205ENST00000549639 SPTBN5Q9NRC6 3674 aaKnown RBP27.2■■□□□ 1.95
USP44-205ENST00000549639 ZNF862O60290 1169 aa27.2■■□□□ 1.94
USP44-205ENST00000549639 DGKIO75912 1065 aa27.2■■□□□ 1.94
USP44-205ENST00000549639 PRKCEQ02156 737 aa27.2■■□□□ 1.94
USP44-205ENST00000549639 NFX1Q12986 1120 aaKnown RBP27.2■■□□□ 1.94
USP44-205ENST00000549639 LETM2Q2VYF4 491 aa27.2■■□□□ 1.94
USP44-205ENST00000549639 TRMT1LQ7Z2T5 733 aaKnown RBP27.2■■□□□ 1.94
USP44-205ENST00000549639 CRIPAKQ8N1N5 446 aa27.2■■□□□ 1.94
USP44-205ENST00000549639 LINC01599Q8WXQ3 324 aa27.2■■□□□ 1.94
USP44-205ENST00000549639 MRPL38Q96DV4 380 aaKnown RBP27.2■■□□□ 1.94
USP44-205ENST00000549639 FAM20AQ96MK3 541 aa27.2■■□□□ 1.94
USP44-205ENST00000549639 BRMS1Q9HCU9 246 aa27.2■■□□□ 1.94
USP44-205ENST00000549639 ERVK-5Q9HDB9 667 aa27.2■■□□□ 1.94
USP44-205ENST00000549639 REV3LO60673 3130 aa27.2■■□□□ 1.94
USP44-205ENST00000549639 WDR81Q562E7 1941 aa27.2■■□□□ 1.94
USP44-205ENST00000549639 EVPLQ92817 2033 aa27.19■■□□□ 1.94
USP44-205ENST00000549639 RALGAPA2Q2PPJ7 1873 aa27.19■■□□□ 1.94
USP44-205ENST00000549639 C5orf67F2Z3F1 127 aa27.19■■□□□ 1.94
USP44-205ENST00000549639 GPM6BQ13491 265 aa27.19■■□□□ 1.94
USP44-205ENST00000549639 BTG3Q14201 252 aaPredicted RBP27.19■■□□□ 1.94
USP44-205ENST00000549639 ME3Q16798 604 aa27.19■■□□□ 1.94
USP44-205ENST00000549639 CLP1Q92989 425 aaKnown RBP27.19■■□□□ 1.94
USP44-205ENST00000549639 C1orf112Q9NSG2 853 aa27.19■■□□□ 1.94
USP44-205ENST00000549639 NOC2LQ9Y3T9 749 aaKnown RBP27.19■■□□□ 1.94
USP44-205ENST00000549639 LOXHD1Q8IVV2 1947 aa27.19■■□□□ 1.94
USP44-205ENST00000549639 TBX3O15119 743 aa27.18■■□□□ 1.94
USP44-205ENST00000549639 XKR3Q5GH77 459 aa27.18■■□□□ 1.94
USP44-205ENST00000549639 EFCAB12Q6NXP0 572 aa27.18■■□□□ 1.94
USP44-205ENST00000549639 CMTR2Q8IYT2 770 aaKnown RBP27.18■■□□□ 1.94
USP44-205ENST00000549639 LINC01465Q8N7H1 131 aa27.18■■□□□ 1.94
USP44-205ENST00000549639 TMX1Q9H3N1 280 aa27.18■■□□□ 1.94
USP44-205ENST00000549639 GPR32O75388 356 aa27.17■■□□□ 1.94
USP44-205ENST00000549639 BMPR1AP36894 532 aa27.17■■□□□ 1.94
USP44-205ENST00000549639 CDC42EP1Q00587 391 aa27.17■■□□□ 1.94
USP44-205ENST00000549639 UGCGQ16739 394 aa27.17■■□□□ 1.94
USP44-205ENST00000549639 KIZQ2M2Z5 673 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms