RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 GINS2Q9Y248 185 aa12.41□□□□□ -0.42
TRAFD1-206ENST00000549358 DOCK5Q9H7D0 1870 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 DENND3A2RUS2 1198 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 MEIS2O14770 477 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 WEE2P0C1S8 567 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 FGFR1P11362 822 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 ITGB5P18084 799 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 PLCB3Q01970 1234 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 PLCB4Q15147 1175 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 TPRNQ4KMQ1 711 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 SLC24A5Q71RS6 500 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 TMC7Q7Z402 723 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 NME8Q8N427 588 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 FLCNQ8NFG4 579 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 CASP10Q92851 521 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 TNPO1Q92973 898 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 GPRASP2Q96D09 838 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 NECTIN4Q96NY8 510 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 PCYT2Q99447 389 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 AZI2Q9H6S1 392 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 CWH43Q9H720 699 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 ERVK-5Q9HDB9 667 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 NGRNQ9NPE2 291 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 LIMD1Q9UGP4 676 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 LZTS1Q9Y250 596 aa12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 NOC2LQ9Y3T9 749 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-206ENST00000549358 PIK3CDO00329 1044 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 PI15O43692 258 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 RPS6KA5O75582 802 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 LAG3P18627 525 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 PDE4AP27815 886 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 KRT17Q04695 432 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 ITIH3Q06033 890 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 MTMR1Q13613 665 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 MS4A3Q96HJ5 214 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 DSCC1Q9BVC3 393 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 CDHR5Q9HBB8 845 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 ATP6V0A4Q9HBG4 840 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 SENP2Q9HC62 589 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 C1orf112Q9NSG2 853 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 DIAPH3Q9NSV4 1193 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 ST3GAL5Q9UNP4 418 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 HCFC2Q9Y5Z7 792 aa12.39□□□□□ -0.43
TRAFD1-206ENST00000549358 KDM3AQ9Y4C1 1321 aa12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 SMIM35A0A1B0GVV1 85 aa12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 MED19A0JLT2 244 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 C9IYK1 514 aa12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 IFIT3O14879 490 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 ARP10275 920 aa12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 PBX3P40426 434 aa12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 TROAPQ12815 778 aa12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 MTHFD1LQ6UB35 978 aa12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 LRRC55Q6ZSA7 311 aa12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 MRPL43Q8N983 215 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 KCNG4Q8TDN1 519 aa12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 TMEM40Q8WWA1 233 aa12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 JPH1Q9HDC5 661 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-206ENST00000549358 ZDBF2Q9HCK1 2354 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 ERICH2A1L162 156 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 GPR182O15218 404 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 KLRC1P26715 233 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 CA8P35219 290 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 MTHFRP42898 656 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 STAT5BP51692 787 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 FAM189BP81408 668 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 ANGPT1Q15389 498 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 CWF19L1Q69YN2 538 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 KANK3Q6NY19 840 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 KCNT2Q6UVM3 1135 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 PLPPR4Q7Z2D5 763 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 ZDHHC14Q8IZN3 488 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 C12orf76Q8N812 135 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 TDRD5Q8NAT2 981 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 RMDN1Q96DB5 314 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 RRP36Q96EU6 259 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 LNPKQ9C0E8 428 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 TMEM161AQ9NX61 479 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 SLC9A2Q9UBY0 812 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 DBR1Q9UK59 544 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 UBIAD1Q9Y5Z9 338 aa12.37□□□□□ -0.43
TRAFD1-206ENST00000549358 MAFGO15525 162 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 CLASP2O75122 1294 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 NPR3P17342 541 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 AOC1P19801 751 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 TRDNQ13061 729 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 SMC1AQ14683 1233 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 ATAT1Q5SQI0 421 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 ODR4Q5SWX8 454 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 RARS2Q5T160 578 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 FAM43BQ6ZT52 329 aaPredicted RBP12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 DGLUCYQ7Z3D6 616 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 KIAA2013Q8IYS2 634 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 KIAA0319LQ8IZA0 1049 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 PLCD3Q8N3E9 789 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 ZNF558Q96NG5 402 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 CASD1Q96PB1 797 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 PPP1R16BQ96T49 567 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 ELAC1Q9H777 363 aaKnown RBP12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 PSTPIP2Q9H939 334 aa12.36□□□□□ -0.43
TRAFD1-206ENST00000549358 JADE2Q9NQC1 790 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms