RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 PHLPP2Q6ZVD8 1323 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 POTEFA5A3E0 1075 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 HAS3O00219 553 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 CTAGE5O15320 804 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 SORBS3O60504 671 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 MED24O75448 989 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 DGAT1O75907 488 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 TMOD1P28289 359 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 DNM2P50570 870 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 BEX3Q00994 111 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 GRIN1Q05586 938 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 PPFIA1Q13136 1202 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 GRB10Q13322 594 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 CTTNQ14247 550 aaKnown RBP10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 KARSQ15046 597 aaKnown RBP10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 PLCB4Q15147 1175 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 KIAA0753Q2KHM9 967 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 XKR9Q5GH70 373 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 CCSAPQ6IQ19 270 aaPredicted RBP10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 POTEGQ6S5H5 508 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 C7orf31Q8N865 590 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 SYT2Q8N9I0 419 aaPredicted RBP10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 CNNM3Q8NE01 707 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 TCP11Q8WWU5 503 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 RAD54LQ92698 747 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 VTI1AQ96AJ9 217 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 LENG1Q96BZ8 264 aaPredicted RBP10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 CEP170P1Q96L14 293 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 MMTAG2Q9BU76 263 aaKnown RBP10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 C17orf75Q9HAS0 396 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 STARD7Q9NQZ5 370 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 LMBRD1Q9NUN5 540 aa10.88□□□□□ -0.67
SMARCD1-206ENST00000549274 MYH11P35749 1972 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 A0A1B0GVL5 298 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 PP2D1A8MPX8 630 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 TLR3O15455 904 aaKnown RBP10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 ZNF202O95125 648 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 PLA2G4BP0C869 781 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 ZNF286BP0CG31 522 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 RARRES1P49788 294 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 NDUFA8P51970 172 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 POLGP54098 1239 aaPredicted RBP10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 TBC1D8BQ0IIM8 1120 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 SPECC1Q5M775 1068 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 TAF2Q6P1X5 1199 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 FAM43BQ6ZT52 329 aaPredicted RBP10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 NECAB2Q7Z6G3 386 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 RSPH3Q86UC2 560 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 CCDC155Q8N6L0 562 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 PDILTQ8N807 584 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 SLC17A8Q8NDX2 589 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 KIFAP3Q92845 792 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 DHX58Q96C10 678 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 DRC1Q96MC2 740 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 PCYT2Q99447 389 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 CYP26B1Q9NR63 512 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 ODF2LQ9ULJ1 636 aa10.87□□□□□ -0.67
SMARCD1-206ENST00000549274 A0A1W2PQ45 241 aaPredicted RBP10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 A0A1W2PQY0 241 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 C17orf102A2RUQ5 167 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 ASAP2O43150 1006 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 ZNF862O60290 1169 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 CAND2O75155 1236 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 SMC2O95347 1197 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 KRT18P05783 430 aaKnown RBP10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 GUCY2CP25092 1073 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 MARK3P27448 753 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 CDC25AP30304 524 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 ITGA7Q13683 1181 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 PPP2R5AQ15172 486 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 GRIK4Q16099 956 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 UGCGQ16739 394 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 TMEM63BQ5T3F8 832 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 C1orf53Q5VUE5 145 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 CNNM4Q6P4Q7 775 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 CXCL17Q6UXB2 119 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 TRIM50Q86XT4 487 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 FMR1NBQ8N0W7 255 aaPredicted RBP10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 PNMA5Q96PV4 448 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 MAP7D2Q96T17 732 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 BHMT2Q9H2M3 363 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 BCAS3Q9H6U6 928 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 ATP6V0A4Q9HBG4 840 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 SEL1LQ9UBV2 794 aa10.86□□□□□ -0.67
SMARCD1-206ENST00000549274 MYADML2A6NDP7 307 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 H0YCG3 227 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 ARVCFO00192 962 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 TBCAO75347 108 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 SSBP05455 408 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 SMIM10L2AP0DMW4 78 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 SMIM10L2BP0DMW5 78 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 INSRRP14616 1297 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 GAP43P17677 238 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 SLC12A3P55017 1021 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 MXD4Q14582 209 aaPredicted RBP10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 TARBP2Q15633 366 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 E2F4Q16254 413 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 MTERF2Q49AM1 385 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 FAM47CQ5HY64 1035 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 IER5Q5VY09 327 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms