RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ATP2B4P23634 1241 aa15.42■□□□□ 0.06
RAPGEF3-218ENST00000548919 POLD1P28340 1107 aa15.42■□□□□ 0.06
RAPGEF3-218ENST00000548919 COPB2P35606 906 aa15.42■□□□□ 0.06
RAPGEF3-218ENST00000548919 SCNN1DP51172 638 aa15.42■□□□□ 0.06
RAPGEF3-218ENST00000548919 SPIRE1Q08AE8 756 aa15.42■□□□□ 0.06
RAPGEF3-218ENST00000548919 QPCTQ16769 361 aa15.42■□□□□ 0.06
RAPGEF3-218ENST00000548919 TBC1D16Q8TBP0 767 aa15.42■□□□□ 0.06
RAPGEF3-218ENST00000548919 CLSTN1O94985 981 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 FSBPO95073 299 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 NR3C1P04150 777 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 H2AFZP0C0S5 128 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 IFI16Q16666 785 aaKnown RBP15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 LRIG3Q6UXM1 1119 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 SLC30A10Q6XR72 485 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 H2AFVQ71UI9 128 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 SLC35C1Q96A29 364 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 LRRC45Q96CN5 670 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 TRIM51Q9BSJ1 452 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 SLC12A6Q9UHW9 1150 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 NOVA2Q9UNW9 492 aaKnown RBP15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 BZW2Q9Y6E2 419 aaKnown RBP15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 ASTN1O14525 1302 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 ATXN2Q99700 1313 aaKnown RBP15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 PITPNM2Q9BZ72 1349 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 TRAPPC3LQ5T215 181 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 GPATCH4Q5T3I0 446 aaKnown RBP15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 MICALCLQ6ZW33 695 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 EPM2AIP1Q7L775 607 aaPredicted RBP15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 NT5DC3Q86UY8 548 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 C1orf131Q8NDD1 294 aaKnown RBP15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 DNM3Q9UQ16 869 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 STXBP5LQ9Y2K9 1186 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 GCNT3O95395 438 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 JAM2P57087 298 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 SPRED3Q2MJR0 410 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 SPATS2Q86XZ4 545 aaKnown RBP15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 ETNPPLQ8TBG4 499 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 RUSC1Q9BVN2 902 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 USP40Q9NVE5 1235 aa15.41■□□□□ 0.06
RAPGEF3-218ENST00000548919 FOCADQ5VW36 1801 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 MEIS2O14770 477 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 FGGP02679 453 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 ABCB4P21439 1286 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 PRKCIP41743 596 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 GALCP54803 685 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 ARHGAP4P98171 946 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 DHX9Q08211 1270 aaKnown RBP15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 TMC3Q7Z5M5 1100 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 GLYCTKQ8IVS8 523 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 KSR1Q8IVT5 923 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 LNX1Q8TBB1 728 aaPredicted RBP15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 CALR3Q96L12 384 aaKnown RBP15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 PAGR1Q9BTK6 254 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 BHMT2Q9H2M3 363 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 SWAP70Q9UH65 585 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 DDX20Q9UHI6 824 aaKnown RBP15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 NENFQ9UMX5 172 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 GMNCA6NCL1 334 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 BHMG1C9JSJ3 638 aaPredicted RBP15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 FAM86B1E9PN63 330 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 CALUO43852 315 aaPredicted RBP15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 BUB1BO60566 1050 aaPredicted RBP15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 FAM86B2P0C5J1 330 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 MAGOHP61326 146 aaKnown RBP15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 PRPF4BQ13523 1007 aaKnown RBP15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 USH1GQ495M9 461 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 FAM196AQ6ZSG2 479 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 SLFN11Q7Z7L1 901 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 ZFPM1Q8IX07 1006 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 CCDC13Q8IYE1 715 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 CERS5Q8N5B7 392 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 SYT2Q8N9I0 419 aaPredicted RBP15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 CYP2W1Q8TAV3 490 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 TBC1D22AQ8WUA7 517 aa15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 MAGOHBQ96A72 148 aaKnown RBP15.4■□□□□ 0.06
RAPGEF3-218ENST00000548919 IGSF9BQ9UPX0 1349 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 PDXKO00764 312 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 SLFN12Q8IYM2 578 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 CABS1Q96KC9 395 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 SUCLA2Q9P2R7 463 aaPredicted RBP15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 PPP1R9AQ9ULJ8 1098 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 KIF13BQ9NQT8 1826 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 AHDC1Q5TGY3 1603 aaPredicted RBP15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 EVI5O60447 810 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 NFIAQ12857 509 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 DCAF12L1Q5VU92 463 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 C6orf89Q6UWU4 347 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 YTHDF3Q7Z739 585 aaKnown RBP15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 RASGEF1CQ8N431 466 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 ARFGAP2Q8N6H7 521 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 EIF1ADQ8N9N8 165 aaKnown RBP15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 HES6Q96HZ4 224 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 CEP89Q96ST8 783 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 RGL1Q9NZL6 768 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 ATP8A1Q9Y2Q0 1164 aa15.39■□□□□ 0.05
RAPGEF3-218ENST00000548919 CYP3A7-CYP3A51PA0A087WV96 503 aa15.38■□□□□ 0.05
RAPGEF3-218ENST00000548919 CCDC188H7C350 402 aa15.38■□□□□ 0.05
RAPGEF3-218ENST00000548919 TRAPPC3O43617 180 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms