RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 FGF18O76093 207 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 ASGR2P07307 311 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 ATXN1P54253 815 aaKnown RBP9.73□□□□□ -0.85
TROAP-208ENST00000548817 ERVFC1P60507 584 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 ARHGAP4P98171 946 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 SP4Q02446 784 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 MGAT3Q09327 533 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 TBC1D8BQ0IIM8 1120 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 TDGQ13569 410 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 FBXO47Q5MNV8 452 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 CASC1Q6TDU7 716 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 NFXL1Q6ZNB6 911 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 RUFY4Q6ZNE9 571 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 SUMF1Q8NBK3 374 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 EXOC6Q8TAG9 804 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 LMBR1Q8WVP7 490 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 GPKOWQ92917 476 aaPredicted RBP eCLIP9.73□□□□□ -0.85
TROAP-208ENST00000548817 COL26A1Q96A83 441 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 CHAMP1Q96JM3 812 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 CDHR1Q96JP9 859 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 LZTS2Q9BRK4 669 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 ERVK-5Q9HDB9 667 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 CYP26B1Q9NR63 512 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 LIMD1Q9UGP4 676 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 PUF60Q9UHX1 559 aaKnown RBP9.73□□□□□ -0.85
TROAP-208ENST00000548817 CDV3Q9UKY7 258 aaKnown RBP9.73□□□□□ -0.85
TROAP-208ENST00000548817 DUSP12Q9UNI6 340 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 NRCAMQ92823 1304 aa9.73□□□□□ -0.85
TROAP-208ENST00000548817 SETXQ7Z333 2677 aaKnown RBP9.72□□□□□ -0.85
TROAP-208ENST00000548817 E7EWF7 191 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 RBAK-RBAKDNI3L0D1 243 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 PPFIA3O75145 1194 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 CYP21A2P08686 494 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 SCG2P13521 617 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 GNAQP50148 359 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 PLCB3Q01970 1234 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 TROAPQ12815 778 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 PAN2Q504Q3 1202 aaKnown RBP9.72□□□□□ -0.85
TROAP-208ENST00000548817 TTC22Q5TAA0 569 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 KIAA1841Q6NSI8 718 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 TMTC2Q8N394 836 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 DCLK2Q8N568 766 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 LINC01599Q8WXQ3 324 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 TNPO1Q92973 898 aaKnown RBP9.72□□□□□ -0.85
TROAP-208ENST00000548817 ACSF2Q96CM8 615 aaPredicted RBP9.72□□□□□ -0.85
TROAP-208ENST00000548817 INPP4AQ96PE3 977 aaPredicted RBP9.72□□□□□ -0.85
TROAP-208ENST00000548817 MAP3K14Q99558 947 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 GPR20Q99678 358 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 SENP7Q9BQF6 1050 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 FBXL21Q9UKT6 434 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 DENND4AQ7Z401 1863 aa9.72□□□□□ -0.85
TROAP-208ENST00000548817 CCDC69A6NI79 296 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 SPTLC1O15269 473 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 CYTH3O43739 400 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 KINO60870 393 aaKnown RBP9.71□□□□□ -0.86
TROAP-208ENST00000548817 EOMESO95936 686 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 SP9P0CG40 484 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 SMARCA1P28370 1054 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 MRPS9P82933 396 aaKnown RBP9.71□□□□□ -0.86
TROAP-208ENST00000548817 DMWDQ09019 674 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 ATAT1Q5SQI0 421 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 PCNX4Q63HM2 1172 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 USP17L6PQ6QN14 398 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 THNSL1Q8IYQ7 743 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 SIX5Q8N196 739 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 MRPS27Q92552 414 aaKnown RBP9.71□□□□□ -0.86
TROAP-208ENST00000548817 GLG1Q92896 1179 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 SECISBP2LQ93073 1101 aaKnown RBP9.71□□□□□ -0.86
TROAP-208ENST00000548817 APOL5Q9BWW9 433 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 SPZ1Q9BXG8 430 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 BCAS3Q9H6U6 928 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 PSTPIP2Q9H939 334 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 DZANK1Q9NVP4 752 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 TMEM260Q9NX78 707 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 NCDNQ9UBB6 729 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 WNT16Q9UBV4 365 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 LRFN2Q9ULH4 789 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 HCFC2Q9Y5Z7 792 aa9.71□□□□□ -0.86
TROAP-208ENST00000548817 FNDC1Q4ZHG4 1894 aaPredicted RBP9.7□□□□□ -0.86
TROAP-208ENST00000548817 DOCK5Q9H7D0 1870 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 LOXHD1Q8IVV2 1947 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 SPDYE3A6NKU9 549 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 DDAH1O94760 285 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 CALM1P0DP23 149 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 CALM2P0DP24 149 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 CALM3P0DP25 149 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 LAG3P18627 525 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 CHMLP26374 656 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 PPM1AP35813 382 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 TCF7P36402 384 aaPredicted RBP9.7□□□□□ -0.86
TROAP-208ENST00000548817 PTH1RQ03431 593 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 PPFIA1Q13136 1202 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 ZNF528Q3MIS6 628 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 VARS2Q5ST30 1063 aaKnown RBP9.7□□□□□ -0.86
TROAP-208ENST00000548817 SPOUT1Q5T280 376 aaKnown RBP9.7□□□□□ -0.86
TROAP-208ENST00000548817 PLPP4Q5VZY2 271 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 LLGL2Q6P1M3 1020 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 OTOP3Q7RTS5 596 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 RTN4RL1Q86UN2 441 aaPredicted RBP9.7□□□□□ -0.86
TROAP-208ENST00000548817 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms