RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 PON1P27169 355 aa25.14■■□□□ 1.61
NPAS3-206ENST00000548645 GBP2P32456 591 aaPredicted RBP25.14■■□□□ 1.61
NPAS3-206ENST00000548645 CDK8P49336 464 aa25.14■■□□□ 1.61
NPAS3-206ENST00000548645 GSTO1P78417 241 aa25.14■■□□□ 1.61
NPAS3-206ENST00000548645 ATP8B4Q8TF62 1192 aa25.14■■□□□ 1.61
NPAS3-206ENST00000548645 TRIM51Q9BSJ1 452 aa25.14■■□□□ 1.61
NPAS3-206ENST00000548645 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.14■■□□□ 1.61
NPAS3-206ENST00000548645 PLA2G4BP0C869 781 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 PIGWQ7Z7B1 504 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 GPBP1Q86WP2 473 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 RBM46Q8TBY0 533 aaKnown RBP25.13■■□□□ 1.61
NPAS3-206ENST00000548645 PCDHA12Q9UN75 941 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 SLC12A4Q9UP95 1085 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 DIS3Q9Y2L1 958 aaKnown RBP25.13■■□□□ 1.61
NPAS3-206ENST00000548645 LOC102724428A0A0B4J2F2 783 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 CCDC169A6NNP5 214 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 E9PMD0 336 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 MMP13P45452 471 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 SIK1P57059 783 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 PPP4CP60510 307 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 CRELD2Q6UXH1 353 aaPredicted RBP25.13■■□□□ 1.61
NPAS3-206ENST00000548645 MAPKAPK5Q8IW41 473 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 HAS1Q92839 578 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 SELENOSQ9BQE4 189 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 SAMD15Q9P1V8 674 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 PTENP60484 403 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 NEK9Q8TD19 979 aa25.13■■□□□ 1.61
NPAS3-206ENST00000548645 PABPC3Q9H361 631 aaKnown RBP25.13■■□□□ 1.61
NPAS3-206ENST00000548645 RSRC1Q96IZ7 334 aaKnown RBP25.12■■□□□ 1.61
NPAS3-206ENST00000548645 KIAA1024Q9UPX6 916 aa25.12■■□□□ 1.61
NPAS3-206ENST00000548645 USP17L5A8MUK1 530 aa25.12■■□□□ 1.61
NPAS3-206ENST00000548645 KRT18P05783 430 aaKnown RBP25.12■■□□□ 1.61
NPAS3-206ENST00000548645 CACNB1Q02641 598 aaPredicted RBP25.12■■□□□ 1.61
NPAS3-206ENST00000548645 RIPK1Q13546 671 aa25.12■■□□□ 1.61
NPAS3-206ENST00000548645 ITPK1Q13572 414 aa25.12■■□□□ 1.61
NPAS3-206ENST00000548645 KCTD19Q17RG1 926 aaPredicted RBP25.12■■□□□ 1.61
NPAS3-206ENST00000548645 DENND2CQ68D51 928 aa25.12■■□□□ 1.61
NPAS3-206ENST00000548645 C16orf86Q6ZW13 317 aa25.12■■□□□ 1.61
NPAS3-206ENST00000548645 WDR66Q8TBY9 1149 aa25.12■■□□□ 1.61
NPAS3-206ENST00000548645 NAP1L3Q99457 506 aaPredicted RBP25.12■■□□□ 1.61
NPAS3-206ENST00000548645 ERP44Q9BS26 406 aa25.12■■□□□ 1.61
NPAS3-206ENST00000548645 GOPCQ9HD26 462 aa25.12■■□□□ 1.61
NPAS3-206ENST00000548645 SNED1Q8TER0 1413 aa25.11■■□□□ 1.61
NPAS3-206ENST00000548645 CFAP73A6NFT4 308 aa25.11■■□□□ 1.61
NPAS3-206ENST00000548645 XRCC5P13010 732 aaKnown RBP25.11■■□□□ 1.61
NPAS3-206ENST00000548645 PMS2P54278 862 aa25.11■■□□□ 1.61
NPAS3-206ENST00000548645 DR1Q01658 176 aa25.11■■□□□ 1.61
NPAS3-206ENST00000548645 DUPD1Q68J44 220 aa25.11■■□□□ 1.61
NPAS3-206ENST00000548645 ATXN2LQ8WWM7 1075 aaKnown RBP25.11■■□□□ 1.61
NPAS3-206ENST00000548645 HOOK2Q96ED9 719 aa25.11■■□□□ 1.61
NPAS3-206ENST00000548645 DAAM1Q9Y4D1 1078 aa25.11■■□□□ 1.61
NPAS3-206ENST00000548645 NPHP3-ACAD11A0A0J9YXS1 232 aa25.11■■□□□ 1.61
NPAS3-206ENST00000548645 GOLGA6L10A0A0M3HER8 536 aa25.11■■□□□ 1.61
NPAS3-206ENST00000548645 U2AF1L4Q8WU68 220 aaKnown RBP25.11■■□□□ 1.61
NPAS3-206ENST00000548645 CEP95Q96GE4 821 aa25.11■■□□□ 1.61
NPAS3-206ENST00000548645 ZDHHC18Q9NUE0 388 aa25.11■■□□□ 1.61
NPAS3-206ENST00000548645 KIF13BQ9NQT8 1826 aa25.11■■□□□ 1.61
NPAS3-206ENST00000548645 CYP11B2P19099 503 aa25.1■■□□□ 1.61
NPAS3-206ENST00000548645 DIXDC1Q155Q3 683 aa25.1■■□□□ 1.61
NPAS3-206ENST00000548645 CROCCP2Q86T23 111 aa25.1■■□□□ 1.61
NPAS3-206ENST00000548645 TXNRD3Q86VQ6 643 aa25.1■■□□□ 1.61
NPAS3-206ENST00000548645 TBC1D31Q96DN5 1066 aa25.1■■□□□ 1.61
NPAS3-206ENST00000548645 ZHX3Q9H4I2 956 aa25.1■■□□□ 1.61
NPAS3-206ENST00000548645 FAM187AA6NFU0 413 aa25.1■■□□□ 1.61
NPAS3-206ENST00000548645 DDX3XO00571 662 aaKnown RBP eCLIP25.1■■□□□ 1.61
NPAS3-206ENST00000548645 BUB1BO60566 1050 aaPredicted RBP25.1■■□□□ 1.61
NPAS3-206ENST00000548645 SHBGP04278 402 aa25.1■■□□□ 1.61
NPAS3-206ENST00000548645 SLC8A3P57103 927 aa25.1■■□□□ 1.61
NPAS3-206ENST00000548645 TRAF3IP3Q9Y228 551 aa25.1■■□□□ 1.61
NPAS3-206ENST00000548645 SPDYE3A6NKU9 549 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 RGS16O15492 202 aaPredicted RBP25.09■■□□□ 1.61
NPAS3-206ENST00000548645 SLC10A5Q5PT55 438 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 CCHCR1Q8TD31 782 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 EPB41L4BQ9H329 900 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 INTS9Q9NV88 658 aaKnown RBP25.09■■□□□ 1.61
NPAS3-206ENST00000548645 LDHCP07864 332 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 FERP16591 822 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 FMNL3Q8IVF7 1028 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 LRRC34Q8IZ02 419 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 TCP11Q8WWU5 503 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 NSRP1Q9H0G5 558 aaKnown RBP25.09■■□□□ 1.61
NPAS3-206ENST00000548645 NAV1Q8NEY1 1877 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 PITPNM2Q9BZ72 1349 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 TLDC2A0PJX2 215 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 FRMD3A2A2Y4 597 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 GFPT2O94808 682 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 RPSAP08865 295 aaKnown RBP25.09■■□□□ 1.61
NPAS3-206ENST00000548645 GALCP54803 685 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 JAM2P57087 298 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 EPHA7Q15375 998 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 TRPM8Q7Z2W7 1104 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 NR2E1Q9Y466 385 aa25.09■■□□□ 1.61
NPAS3-206ENST00000548645 FRMPD2Q68DX3 1309 aaPredicted RBP25.08■■□□□ 1.61
NPAS3-206ENST00000548645 PRPF4BQ13523 1007 aaKnown RBP25.08■■□□□ 1.61
NPAS3-206ENST00000548645 GJA10Q969M2 543 aa25.08■■□□□ 1.61
NPAS3-206ENST00000548645 FAM212AQ96EL1 285 aa25.08■■□□□ 1.61
NPAS3-206ENST00000548645 ADAM7Q9H2U9 754 aa25.08■■□□□ 1.61
NPAS3-206ENST00000548645 CCDC134Q9H6E4 229 aa25.08■■□□□ 1.61
NPAS3-206ENST00000548645 EBF2Q9HAK2 575 aa25.08■■□□□ 1.61
NPAS3-206ENST00000548645 CLTAP09496 248 aa25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms