RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 LENG9Q96B70 501 aa17.31■□□□□ 0.36
SNX29P1-201ENST00000548357 C11orf84Q9BUA3 381 aaPredicted RBP17.31■□□□□ 0.36
SNX29P1-201ENST00000548357 PLAGL2Q9UPG8 496 aa17.31■□□□□ 0.36
SNX29P1-201ENST00000548357 GINS2Q9Y248 185 aa17.31■□□□□ 0.36
SNX29P1-201ENST00000548357 C22orf31O95567 290 aa17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 RB1P06400 928 aa17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 CYP3A4P08684 503 aa17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 SSTR3P32745 418 aaPredicted RBP17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 HSPA4P34932 840 aa17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 ZP2Q05996 745 aa17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 NTRK3Q16288 839 aa17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 CMTR2Q8IYT2 770 aaKnown RBP17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 KLHL23Q8NBE8 558 aa17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 GJA10Q969M2 543 aa17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 ZMYND12Q9H0C1 365 aa17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 IGFLR1Q9H665 355 aa17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 NCOA5Q9HCD5 579 aaKnown RBP17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 ZNF302Q9NR11 478 aa17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 SQORQ9Y6N5 450 aa17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 ARID2Q68CP9 1835 aa17.3■□□□□ 0.36
SNX29P1-201ENST00000548357 ESYT2A0FGR8 921 aa17.29■□□□□ 0.36
SNX29P1-201ENST00000548357 M0QZ92 97 aa17.29■□□□□ 0.36
SNX29P1-201ENST00000548357 IPO5O00410 1097 aaKnown RBP17.29■□□□□ 0.36
SNX29P1-201ENST00000548357 HBP1O60381 514 aa17.29■□□□□ 0.36
SNX29P1-201ENST00000548357 GPR37L1O60883 481 aa17.29■□□□□ 0.36
SNX29P1-201ENST00000548357 VTNP04004 478 aa17.29■□□□□ 0.36
SNX29P1-201ENST00000548357 RCAN1P53805 252 aa17.29■□□□□ 0.36
SNX29P1-201ENST00000548357 NFX1Q12986 1120 aaKnown RBP17.29■□□□□ 0.36
SNX29P1-201ENST00000548357 KRT32Q14532 448 aa17.29■□□□□ 0.36
SNX29P1-201ENST00000548357 PDXDC2PQ6P474 469 aa17.29■□□□□ 0.36
SNX29P1-201ENST00000548357 SPPL3Q8TCT6 385 aa17.29■□□□□ 0.36
SNX29P1-201ENST00000548357 ZNF577Q9BSK1 485 aa17.29■□□□□ 0.36
SNX29P1-201ENST00000548357 LMAN2LQ9H0V9 348 aa17.29■□□□□ 0.36
SNX29P1-201ENST00000548357 PRPF3O43395 683 aaKnown RBP17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 MBTPS2O43462 519 aa17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 RPS6KB1P23443 525 aa17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 RBM10P98175 930 aaKnown RBP17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 UGCGQ16739 394 aa17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 KIZQ2M2Z5 673 aa17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 FAM102BQ5T8I3 360 aa17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 FAM228AQ86W67 206 aa17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 ZNF668Q96K58 619 aaPredicted RBP17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 OSMRQ99650 979 aa17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 FTHL17Q9BXU8 183 aa17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 AGXT2Q9BYV1 514 aa17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 VPS54Q9P1Q0 977 aa17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 RWDD3Q9Y3V2 267 aa17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 MAFBQ9Y5Q3 323 aaPredicted RBP17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 COL1A2P08123 1366 aa17.28■□□□□ 0.36
SNX29P1-201ENST00000548357 C19orf67A6NJJ6 358 aa17.27■□□□□ 0.36
SNX29P1-201ENST00000548357 GPR32O75388 356 aa17.27■□□□□ 0.36
SNX29P1-201ENST00000548357 GLP2RO95838 553 aa17.27■□□□□ 0.36
SNX29P1-201ENST00000548357 SARSP49591 514 aaKnown RBP17.27■□□□□ 0.36
SNX29P1-201ENST00000548357 CLCN3P51790 818 aa17.27■□□□□ 0.36
SNX29P1-201ENST00000548357 PRR16Q569H4 304 aa17.27■□□□□ 0.36
SNX29P1-201ENST00000548357 FAM160B1Q5W0V3 765 aa17.27■□□□□ 0.36
SNX29P1-201ENST00000548357 MIS18BP1Q6P0N0 1132 aa17.27■□□□□ 0.36
SNX29P1-201ENST00000548357 REXO1Q8N1G1 1221 aaKnown RBP17.27■□□□□ 0.36
SNX29P1-201ENST00000548357 ADAM2Q99965 735 aa17.27■□□□□ 0.36
SNX29P1-201ENST00000548357 LARP6Q9BRS8 491 aaKnown RBP17.27■□□□□ 0.36
SNX29P1-201ENST00000548357 PLVAPQ9BX97 442 aa17.27■□□□□ 0.36
SNX29P1-201ENST00000548357 ST3GAL5Q9UNP4 418 aa17.27■□□□□ 0.36
SNX29P1-201ENST00000548357 C9IYK1 514 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 ZNF862O60290 1169 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 DTNBO60941 627 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 RPS6KA5O75582 802 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 HMGB1P09429 215 aaKnown RBP17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 SLC26A2P50443 739 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 CCT2P78371 535 aaKnown RBP17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 FGD1P98174 961 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 ADAM15Q13444 863 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 ZNF484Q5JVG2 852 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 BLOC1S2Q6QNY1 142 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 TEX2Q8IWB9 1127 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 NME8Q8N427 588 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 LINC01465Q8N7H1 131 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 POF1BQ8WVV4 589 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 P2RX5Q93086 422 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 SLC26A6Q9BXS9 759 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 GLT8D2Q9H1C3 349 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 C6orf50Q9HD87 102 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 RNF19AQ9NV58 838 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 CLEC1BQ9P126 229 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 GABBR1Q9UBS5 961 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 KMT2EQ8IZD2 1858 aa17.26■□□□□ 0.35
SNX29P1-201ENST00000548357 TBKBP1A7MCY6 615 aa17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 MSH4O15457 936 aa17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 RPLP2P05387 115 aaKnown RBP17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 FGFR1P11362 822 aa17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 CIITAP33076 1130 aa17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 TOB2Q14106 344 aaPredicted RBP17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 DSC3Q14574 896 aa17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 SMAD2Q15796 467 aaKnown RBP17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 PUS10Q3MIT2 529 aaKnown RBP17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 ZNF746Q6NUN9 644 aaPredicted RBP17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 LRRC71Q8N4P6 559 aa17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 FAM122AQ96E09 287 aa17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 MSLNLQ96KJ4 702 aa17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 RGS18Q9NS28 235 aa17.25■□□□□ 0.35
SNX29P1-201ENST00000548357 MYO10Q9HD67 2058 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms