RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 IER5Q5VY09 327 aa21.03■□□□□ 0.96
PRPF40B-206ENST00000547764 NIFKQ9BYG3 293 aaKnown RBP21.03■□□□□ 0.96
PRPF40B-206ENST00000547764 RGL1Q9NZL6 768 aa21.03■□□□□ 0.96
PRPF40B-206ENST00000547764 SEPT9Q9UHD8 586 aaPredicted RBP21.03■□□□□ 0.96
PRPF40B-206ENST00000547764 ABHD14A-ACY1A0A1B0GW23 586 aa21.02■□□□□ 0.96
PRPF40B-206ENST00000547764 TMEM150BA6NC51 233 aa21.02■□□□□ 0.96
PRPF40B-206ENST00000547764 DDX11L8A8MPP1 907 aa21.02■□□□□ 0.96
PRPF40B-206ENST00000547764 MAGEB2O15479 319 aa21.02■□□□□ 0.96
PRPF40B-206ENST00000547764 GHRP10912 638 aa21.02■□□□□ 0.96
PRPF40B-206ENST00000547764 ATP2A2P16615 1042 aaKnown RBP21.02■□□□□ 0.96
PRPF40B-206ENST00000547764 TARBP2Q15633 366 aaKnown RBP21.02■□□□□ 0.96
PRPF40B-206ENST00000547764 METTL13Q8N6R0 699 aa21.02■□□□□ 0.96
PRPF40B-206ENST00000547764 SNX21Q969T3 373 aa21.02■□□□□ 0.96
PRPF40B-206ENST00000547764 DYDC2Q96IM9 177 aa21.02■□□□□ 0.96
PRPF40B-206ENST00000547764 PBX4Q9BYU1 374 aa21.02■□□□□ 0.96
PRPF40B-206ENST00000547764 WRAP73Q9P2S5 460 aaPredicted RBP21.02■□□□□ 0.96
PRPF40B-206ENST00000547764 EVPLQ92817 2033 aa21.02■□□□□ 0.96
PRPF40B-206ENST00000547764 M0QZ92 97 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 DKC1O60832 514 aaKnown RBP eCLIP21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 OR52Z1P0C646 297 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 PBX2P40425 430 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 WDR5P61964 334 aaKnown RBP21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 LPIN1Q14693 890 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 MTERF2Q49AM1 385 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 FBXO47Q5MNV8 452 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 EFCAB12Q6NXP0 572 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 ANO5Q75V66 913 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 Q7L0L9 218 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 C4orf32Q8N8J7 132 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 SEPT8Q92599 483 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 INTS4Q96HW7 963 aaKnown RBP21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 CEP89Q96ST8 783 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 SH2D3AQ9BRG2 576 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 LXNQ9BS40 222 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 CELF4Q9BZC1 486 aaKnown RBP21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 PCDHB6Q9Y5E3 794 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 TRPV2Q9Y5S1 764 aa21.01■□□□□ 0.95
PRPF40B-206ENST00000547764 EFCAB14O75071 495 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 SLITRK3O94933 977 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 DNAJB2P25686 324 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 KCNJ6P48051 423 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 CLCN3P51790 818 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 RABGGTBP53611 331 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 CYP4A11Q02928 519 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 TBC1D8BQ0IIM8 1120 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 CTTNQ14247 550 aaKnown RBP21■□□□□ 0.95
PRPF40B-206ENST00000547764 C4orf19Q8IY42 314 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 LRRC71Q8N4P6 559 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 DEFB123Q8N688 67 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 LINC01465Q8N7H1 131 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 PHOSPHO2Q8TCD6 241 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 SLC9A7Q96T83 725 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 HSD17B14Q9BPX1 270 aa21■□□□□ 0.95
PRPF40B-206ENST00000547764 EIF2AK1Q9BQI3 630 aaKnown RBP21■□□□□ 0.95
PRPF40B-206ENST00000547764 IFIH1Q9BYX4 1025 aaKnown RBP21■□□□□ 0.95
PRPF40B-206ENST00000547764 SIP14410 1827 aa20.99■□□□□ 0.95
PRPF40B-206ENST00000547764 POTEMA6NI47 508 aa20.99■□□□□ 0.95
PRPF40B-206ENST00000547764 TECP42680 631 aa20.99■□□□□ 0.95
PRPF40B-206ENST00000547764 MKRN4PQ13434 485 aaPredicted RBP20.99■□□□□ 0.95
PRPF40B-206ENST00000547764 PLA2G4FQ68DD2 849 aa20.99■□□□□ 0.95
PRPF40B-206ENST00000547764 TPH2Q8IWU9 490 aa20.99■□□□□ 0.95
PRPF40B-206ENST00000547764 ZSWIM4Q9H7M6 989 aa20.99■□□□□ 0.95
PRPF40B-206ENST00000547764 SUGCTQ9HAC7 445 aa20.99■□□□□ 0.95
PRPF40B-206ENST00000547764 KDM3AQ9Y4C1 1321 aa20.99■□□□□ 0.95
PRPF40B-206ENST00000547764 VTNP04004 478 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 TMOD1P28289 359 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 DEFB103AP81534 67 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 PTGDRQ13258 359 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 RAB30Q15771 203 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 RILPL1Q5EBL4 403 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 ZNF697Q5TEC3 545 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 TSHZ1Q6ZSZ6 1077 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 APBB2Q92870 758 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 TIFAQ96CG3 184 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 AGO3Q9H9G7 860 aaKnown RBP20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 CDHR5Q9HBB8 845 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 CYP26B1Q9NR63 512 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 FOXD4L1Q9NU39 408 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 MSRAQ9UJ68 235 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 GINS2Q9Y248 185 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 SQORQ9Y6N5 450 aa20.98■□□□□ 0.95
PRPF40B-206ENST00000547764 ZBTB39O15060 712 aa20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 SLC34A2O95436 690 aa20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 PDCP20941 246 aa20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 YWHABP31946 246 aaKnown RBP20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 NPEPPSP55786 919 aa20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 TMCO2Q7Z6W1 182 aaPredicted RBP20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 HERC6Q8IVU3 1022 aa20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 ZNF579Q8NAF0 562 aaKnown RBP20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 USP38Q8NB14 1042 aa20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 NEK9Q8TD19 979 aa20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 MAP7D2Q96T17 732 aa20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 PPP1R16BQ96T49 567 aa20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 TTYH1Q9H313 450 aaPredicted RBP20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 AKT3Q9Y243 479 aa20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 YBX2Q9Y2T7 364 aaKnown RBP20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 PCDHA11Q9Y5I1 949 aa20.97■□□□□ 0.95
PRPF40B-206ENST00000547764 IGKV6-21A0A0C4DH24 114 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms