RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 LAMA3Q16787 3333 aa18.33■□□□□ 0.53
CHMP1A-204ENST00000547687 CTIFO43310 598 aaKnown RBP18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 CYBAP13498 195 aa18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 CASP14P31944 242 aa18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 MNX1P50219 401 aaPredicted RBP18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 MRPS9P82933 396 aaKnown RBP18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 UBXN1Q04323 297 aa18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 PGM5Q15124 567 aa18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 GLIPR1L2Q4G1C9 344 aa18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 OLFML2BQ68BL8 750 aa18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 ANKRD35Q8N283 1001 aa18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 DDX12PQ92771 950 aa18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 DPF3Q92784 378 aa18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 NAA15Q9BXJ9 866 aaKnown RBP18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 PXMP2Q9NR77 195 aa18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 PCDH10Q9P2E7 1040 aa18.33■□□□□ 0.52
CHMP1A-204ENST00000547687 SLC26A4O43511 780 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 MFAP3LO75121 409 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 PSMD10O75832 226 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 GYPCP04921 128 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 SETQ01105 290 aaPredicted RBP18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 SYT10Q6XYQ8 523 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 CNGA4Q8IV77 575 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 SLC5A5Q92911 643 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 CCDC51Q96ER9 411 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 PDCD2LQ9BRP1 358 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 ZNF577Q9BSK1 485 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 WDR11Q9BZH6 1224 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 A1CFQ9NQ94 594 aaKnown RBP18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 SLC5A4Q9NY91 659 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 CYP39A1Q9NYL5 469 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 POTEB3A0JP26 581 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 MED24O75448 989 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 IDEP14735 1019 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 COPB2P35606 906 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 TRIM14Q14142 442 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 LRCH2Q5VUJ6 765 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 ARHGEF16Q5VV41 709 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 POTEBQ6S5H4 581 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 TOGARAM2Q6ZUX3 1019 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 OGDHLQ9ULD0 1010 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 KIAA1024Q9UPX6 916 aa18.32■□□□□ 0.52
CHMP1A-204ENST00000547687 SZT2Q5T011 3432 aa18.31■□□□□ 0.52
CHMP1A-204ENST00000547687 LGALS16A8MUM7 142 aa18.31■□□□□ 0.52
CHMP1A-204ENST00000547687 EML1O00423 815 aa18.31■□□□□ 0.52
CHMP1A-204ENST00000547687 MYCNP04198 464 aaPredicted RBP18.31■□□□□ 0.52
CHMP1A-204ENST00000547687 MYCLP12524 364 aaPredicted RBP18.31■□□□□ 0.52
CHMP1A-204ENST00000547687 FXR1P51114 621 aaKnown RBP eCLIP18.31■□□□□ 0.52
CHMP1A-204ENST00000547687 CNTN2Q02246 1040 aa18.31■□□□□ 0.52
CHMP1A-204ENST00000547687 PSMD2Q13200 908 aa18.31■□□□□ 0.52
CHMP1A-204ENST00000547687 HAUS3Q68CZ6 603 aa18.31■□□□□ 0.52
CHMP1A-204ENST00000547687 FAM114A1Q8IWE2 563 aa18.31■□□□□ 0.52
CHMP1A-204ENST00000547687 TINF2Q9BSI4 451 aa18.31■□□□□ 0.52
CHMP1A-204ENST00000547687 KCNH7Q9NS40 1196 aa18.31■□□□□ 0.52
CHMP1A-204ENST00000547687 UBIAD1Q9Y5Z9 338 aa18.31■□□□□ 0.52
CHMP1A-204ENST00000547687 LAMA2P24043 3122 aaKnown RBP18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 ETF1P62495 437 aaKnown RBP18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 CENPPQ6IPU0 288 aa18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 CATSPER3Q86XQ3 398 aa18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 ERMNQ8TAM6 284 aa18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 LENG1Q96BZ8 264 aaPredicted RBP18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 SEMA6BQ9H3T3 888 aa18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 BMP2KQ9NSY1 1161 aaPredicted RBP18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 DDX20Q9UHI6 824 aaKnown RBP18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 DNAJC25-GNG10A0A024R161 153 aa18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 GOLGA6L9A6NEM1 432 aa18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 E9PMD0 336 aa18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 IPO5O00410 1097 aaKnown RBP18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 GAS7O60861 476 aa18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 SPATA31C1P0DKV0 1188 aa18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 PRPF38BQ5VTL8 546 aaKnown RBP18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 CHST13Q8NET6 341 aa18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 ZNF507Q8TCN5 953 aa18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 FGD4Q96M96 766 aa18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 TUBGCP2Q9BSJ2 902 aa18.3■□□□□ 0.52
CHMP1A-204ENST00000547687 SOWAHDA6NJG2 315 aa18.29■□□□□ 0.52
CHMP1A-204ENST00000547687 PES1O00541 588 aaKnown RBP18.29■□□□□ 0.52
CHMP1A-204ENST00000547687 CHMP2AO43633 222 aa18.29■□□□□ 0.52
CHMP1A-204ENST00000547687 SSBP05455 408 aaKnown RBP eCLIP18.29■□□□□ 0.52
CHMP1A-204ENST00000547687 RPA1P27694 616 aa18.29■□□□□ 0.52
CHMP1A-204ENST00000547687 TRIM65Q6PJ69 517 aa18.29■□□□□ 0.52
CHMP1A-204ENST00000547687 NIPA1Q7RTP0 329 aa18.29■□□□□ 0.52
CHMP1A-204ENST00000547687 GUF1Q8N442 669 aaKnown RBP18.29■□□□□ 0.52
CHMP1A-204ENST00000547687 DNAJC19Q96DA6 116 aa18.29■□□□□ 0.52
CHMP1A-204ENST00000547687 JADE2Q9NQC1 790 aa18.29■□□□□ 0.52
CHMP1A-204ENST00000547687 A0A1W2PQC6 194 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 NR3C2P08235 984 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 PLA2G4BP0C869 781 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 DNM2P50570 870 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 EHHADHQ08426 723 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 PPP2R5CQ13362 524 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 MTMR1Q13613 665 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 MTF1Q14872 753 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 POTEGQ6S5H5 508 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 NECAB2Q7Z6G3 386 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 NSUN6Q8TEA1 469 aaKnown RBP18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 CNOT6LQ96LI5 555 aaKnown RBP18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 PKD2L1Q9P0L9 805 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 FBXO40Q9UH90 709 aa18.28■□□□□ 0.52
CHMP1A-204ENST00000547687 PFASO15067 1338 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms