RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 RAB30Q15771 203 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 TTC38Q5R3I4 469 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 MCTP1Q6DN14 999 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 TMCO2Q7Z6W1 182 aaPredicted RBP13.29□□□□□ -0.28
RAB5C-204ENST00000547517 METTL13Q8N6R0 699 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 PPP1R16BQ96T49 567 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 IFIH1Q9BYX4 1025 aaKnown RBP13.29□□□□□ -0.28
RAB5C-204ENST00000547517 TTYH1Q9H313 450 aaPredicted RBP13.29□□□□□ -0.28
RAB5C-204ENST00000547517 NRBP2Q9NSY0 501 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 MSRAQ9UJ68 235 aa13.29□□□□□ -0.28
RAB5C-204ENST00000547517 NOL7Q9UMY1 257 aaKnown RBP13.29□□□□□ -0.28
RAB5C-204ENST00000547517 YBX2Q9Y2T7 364 aaKnown RBP13.29□□□□□ -0.28
RAB5C-204ENST00000547517 H3BQV1 296 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 EFCAB14O75071 495 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 MYOGP15173 224 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 TXKP42681 527 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 QARSP47897 775 aaKnown RBP13.28□□□□□ -0.28
RAB5C-204ENST00000547517 CLCN3P51790 818 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 NBR1Q14596 966 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 ZNF174Q15697 407 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 MTERF2Q49AM1 385 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 FBXO47Q5MNV8 452 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 IER5Q5VY09 327 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 PLA2G4FQ68DD2 849 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 HERC6Q8IVU3 1022 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 LRRC71Q8N4P6 559 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 SH2D3AQ9BRG2 576 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 LXNQ9BS40 222 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 TMEM60Q9H2L4 133 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 NKX2-4Q9H2Z4 354 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 TTC12Q9H892 705 aaPredicted RBP13.28□□□□□ -0.28
RAB5C-204ENST00000547517 GINS2Q9Y248 185 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 PTPRSQ13332 1948 aa13.28□□□□□ -0.28
RAB5C-204ENST00000547517 MICAL3Q7RTP6 2002 aa13.27□□□□□ -0.28
RAB5C-204ENST00000547517 TMEM265A0A087WTH1 108 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 POTEMA6NI47 508 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 DDX11L8A8MPP1 907 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 VTNP04004 478 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 P4HBP07237 508 aaKnown RBP13.27□□□□□ -0.29
RAB5C-204ENST00000547517 OR52Z1P0C646 297 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 U2AF2P26368 475 aaKnown RBP eCLIP13.27□□□□□ -0.29
RAB5C-204ENST00000547517 TRAPPC10P48553 1259 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 CYP4A11Q02928 519 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 TBC1D8BQ0IIM8 1120 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 CUL4AQ13619 759 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 EPHA7Q15375 998 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 XKR3Q5GH77 459 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.27□□□□□ -0.29
RAB5C-204ENST00000547517 TSHZ1Q6ZSZ6 1077 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 KIAA0319LQ8IZA0 1049 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 SLC17A8Q8NDX2 589 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 PHOSPHO2Q8TCD6 241 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 APBB2Q92870 758 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 DYDC2Q96IM9 177 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 MTMR9Q96QG7 549 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 MAP7D2Q96T17 732 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 CELF4Q9BZC1 486 aaKnown RBP13.27□□□□□ -0.29
RAB5C-204ENST00000547517 MTMR10Q9NXD2 777 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 RGL1Q9NZL6 768 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 WRAP73Q9P2S5 460 aaPredicted RBP13.27□□□□□ -0.29
RAB5C-204ENST00000547517 PCDHA12Q9UN75 941 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 PCDHA11Q9Y5I1 949 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 CDH23Q9H251 3354 aa13.27□□□□□ -0.29
RAB5C-204ENST00000547517 MAGEB2O15479 319 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 DKC1O60832 514 aaKnown RBP eCLIP13.26□□□□□ -0.29
RAB5C-204ENST00000547517 STBD1O95210 358 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 AMHP03971 560 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 CD52P31358 61 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 ORC2Q13416 577 aaPredicted RBP13.26□□□□□ -0.29
RAB5C-204ENST00000547517 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
RAB5C-204ENST00000547517 CTTNQ14247 550 aaKnown RBP13.26□□□□□ -0.29
RAB5C-204ENST00000547517 TARBP2Q15633 366 aaKnown RBP13.26□□□□□ -0.29
RAB5C-204ENST00000547517 KIZQ2M2Z5 673 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 PPP2R2DQ66LE6 453 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 EFCAB12Q6NXP0 572 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 FAM117BQ6P1L5 589 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 MYOCDQ8IZQ8 938 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 NME8Q8N427 588 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 GUCD1Q96NT3 240 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 EIF2AK1Q9BQI3 630 aaKnown RBP13.26□□□□□ -0.29
RAB5C-204ENST00000547517 NIFKQ9BYG3 293 aaKnown RBP13.26□□□□□ -0.29
RAB5C-204ENST00000547517 SEMA6BQ9H3T3 888 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 ZNF576Q9H609 170 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 AGO3Q9H9G7 860 aaKnown RBP13.26□□□□□ -0.29
RAB5C-204ENST00000547517 SUGCTQ9HAC7 445 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 AKT3Q9Y243 479 aa13.26□□□□□ -0.29
RAB5C-204ENST00000547517 KDM3AQ9Y4C1 1321 aa13.25□□□□□ -0.29
RAB5C-204ENST00000547517 K7ELQ4 463 aaPredicted RBP13.25□□□□□ -0.29
RAB5C-204ENST00000547517 TLL1O43897 1013 aa13.25□□□□□ -0.29
RAB5C-204ENST00000547517 CA3P07451 260 aa13.25□□□□□ -0.29
RAB5C-204ENST00000547517 TMOD1P28289 359 aa13.25□□□□□ -0.29
RAB5C-204ENST00000547517 TOB1P50616 345 aaPredicted RBP13.25□□□□□ -0.29
RAB5C-204ENST00000547517 PAK2Q13177 524 aa13.25□□□□□ -0.29
RAB5C-204ENST00000547517 TMEM266Q2M3C6 531 aa13.25□□□□□ -0.29
RAB5C-204ENST00000547517 LARP1BQ659C4 914 aaKnown RBP13.25□□□□□ -0.29
RAB5C-204ENST00000547517 ANO5Q75V66 913 aa13.25□□□□□ -0.29
RAB5C-204ENST00000547517 TPH2Q8IWU9 490 aa13.25□□□□□ -0.29
RAB5C-204ENST00000547517 LINC01465Q8N7H1 131 aa13.25□□□□□ -0.29
RAB5C-204ENST00000547517 TMEM40Q8WWA1 233 aa13.25□□□□□ -0.29
RAB5C-204ENST00000547517 SCLT1Q96NL6 688 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms