RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 NEFLP07196 543 aa16.29■□□□□ 0.2
COL2A1-209ENST00000546974 LINC00271P0C7V0 271 aa16.29■□□□□ 0.2
COL2A1-209ENST00000546974 CTNNB1P35222 781 aa16.29■□□□□ 0.2
COL2A1-209ENST00000546974 BMPR1AP36894 532 aa16.29■□□□□ 0.2
COL2A1-209ENST00000546974 NLRP5P59047 1200 aa16.29■□□□□ 0.2
COL2A1-209ENST00000546974 TIGD5Q53EQ6 642 aa16.29■□□□□ 0.2
COL2A1-209ENST00000546974 CKAP2LQ8IYA6 745 aa16.29■□□□□ 0.2
COL2A1-209ENST00000546974 CRIPAKQ8N1N5 446 aa16.29■□□□□ 0.2
COL2A1-209ENST00000546974 C22orf23Q9BZE7 217 aa16.29■□□□□ 0.2
COL2A1-209ENST00000546974 CPLX1O14810 134 aa16.28■□□□□ 0.2
COL2A1-209ENST00000546974 DEXIO95424 95 aa16.28■□□□□ 0.2
COL2A1-209ENST00000546974 BTG3Q14201 252 aaPredicted RBP16.28■□□□□ 0.2
COL2A1-209ENST00000546974 ODR4Q5SWX8 454 aa16.28■□□□□ 0.2
COL2A1-209ENST00000546974 CPLX2Q6PUV4 134 aaKnown RBP16.28■□□□□ 0.2
COL2A1-209ENST00000546974 NPAS4Q8IUM7 802 aa16.28■□□□□ 0.2
COL2A1-209ENST00000546974 FAM177A1Q8N128 213 aaPredicted RBP16.28■□□□□ 0.2
COL2A1-209ENST00000546974 BANK1Q8NDB2 785 aa16.28■□□□□ 0.2
COL2A1-209ENST00000546974 LMAN2LQ9H0V9 348 aa16.28■□□□□ 0.2
COL2A1-209ENST00000546974 TMX1Q9H3N1 280 aa16.28■□□□□ 0.2
COL2A1-209ENST00000546974 GABBR1Q9UBS5 961 aa16.28■□□□□ 0.2
COL2A1-209ENST00000546974 PCDHA4Q9UN74 947 aa16.28■□□□□ 0.2
COL2A1-209ENST00000546974 CEP131Q9UPN4 1083 aa16.28■□□□□ 0.2
COL2A1-209ENST00000546974 ATG2AQ2TAZ0 1938 aa16.27■□□□□ 0.2
COL2A1-209ENST00000546974 WDR64B1ANS9 1081 aa16.27■□□□□ 0.2
COL2A1-209ENST00000546974 MSH4O15457 936 aa16.27■□□□□ 0.2
COL2A1-209ENST00000546974 RPS6KA5O75582 802 aa16.27■□□□□ 0.2
COL2A1-209ENST00000546974 C22orf31O95567 290 aa16.27■□□□□ 0.2
COL2A1-209ENST00000546974 STAG3L1P0CL83 205 aa16.27■□□□□ 0.2
COL2A1-209ENST00000546974 LEXMQ3ZCV2 418 aa16.27■□□□□ 0.2
COL2A1-209ENST00000546974 CMTR2Q8IYT2 770 aaKnown RBP16.27■□□□□ 0.2
COL2A1-209ENST00000546974 FAM167AQ96KS9 214 aa16.27■□□□□ 0.2
COL2A1-209ENST00000546974 RIT2Q99578 217 aa16.27■□□□□ 0.2
COL2A1-209ENST00000546974 C11orf84Q9BUA3 381 aaPredicted RBP16.27■□□□□ 0.2
COL2A1-209ENST00000546974 PLVAPQ9BX97 442 aa16.27■□□□□ 0.2
COL2A1-209ENST00000546974 UPF3BQ9BZI7 483 aaKnown RBP16.27■□□□□ 0.2
COL2A1-209ENST00000546974 ERVK-5Q9HDB9 667 aa16.27■□□□□ 0.2
COL2A1-209ENST00000546974 SAMM50Q9Y512 469 aa16.27■□□□□ 0.2
COL2A1-209ENST00000546974 MAGEB2O15479 319 aa16.26■□□□□ 0.19
COL2A1-209ENST00000546974 NFX1Q12986 1120 aaKnown RBP16.26■□□□□ 0.19
COL2A1-209ENST00000546974 TMEM266Q2M3C6 531 aa16.26■□□□□ 0.19
COL2A1-209ENST00000546974 Q4G0T1 1027 aa16.26■□□□□ 0.19
COL2A1-209ENST00000546974 GALNT17Q6IS24 598 aa16.26■□□□□ 0.19
COL2A1-209ENST00000546974 BLIDQ8IZY5 108 aa16.26■□□□□ 0.19
COL2A1-209ENST00000546974 DAGLBQ8NCG7 672 aa16.26■□□□□ 0.19
COL2A1-209ENST00000546974 TBCKQ8TEA7 893 aa16.26■□□□□ 0.19
COL2A1-209ENST00000546974 SLC5A5Q92911 643 aa16.26■□□□□ 0.19
COL2A1-209ENST00000546974 LARP6Q9BRS8 491 aaKnown RBP16.26■□□□□ 0.19
COL2A1-209ENST00000546974 NSUN3Q9H649 340 aaKnown RBP16.26■□□□□ 0.19
COL2A1-209ENST00000546974 CDHR5Q9HBB8 845 aa16.26■□□□□ 0.19
COL2A1-209ENST00000546974 DISC1Q9NRI5 854 aa16.26■□□□□ 0.19
COL2A1-209ENST00000546974 PDRG1Q9NUG6 133 aa16.26■□□□□ 0.19
COL2A1-209ENST00000546974 GINS2Q9Y248 185 aa16.26■□□□□ 0.19
COL2A1-209ENST00000546974 NOC2LQ9Y3T9 749 aaKnown RBP16.26■□□□□ 0.19
COL2A1-209ENST00000546974 KIAA1671Q9BY89 1806 aa16.26■□□□□ 0.19
COL2A1-209ENST00000546974 FNDC1Q4ZHG4 1894 aaPredicted RBP16.25■□□□□ 0.19
COL2A1-209ENST00000546974 CYP3A7-CYP3A51PA0A087WV96 503 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 M0R2N6 131 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 GPR182O15218 404 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 GAS7O60861 476 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 KCNA5P22460 613 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 CYP3A7P24462 503 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 SFNP31947 248 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 SARSP49591 514 aaKnown RBP16.25■□□□□ 0.19
COL2A1-209ENST00000546974 CRYBB1P53674 252 aaPredicted RBP16.25■□□□□ 0.19
COL2A1-209ENST00000546974 STK3Q13188 491 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 NAALADL2Q58DX5 795 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 TCEAL5Q5H9L2 206 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 TRMT1LQ7Z2T5 733 aaKnown RBP16.25■□□□□ 0.19
COL2A1-209ENST00000546974 METTL13Q8N6R0 699 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 TMEM40Q8WWA1 233 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 P2RX5Q93086 422 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 TEKT3Q9BXF9 490 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 NRBP2Q9NSY0 501 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 RNF216Q9NWF9 866 aaPredicted RBP16.25■□□□□ 0.19
COL2A1-209ENST00000546974 ST3GAL5Q9UNP4 418 aa16.25■□□□□ 0.19
COL2A1-209ENST00000546974 GRM6O15303 877 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 NCK2O43639 380 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 ZNF862O60290 1169 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 MGEA5O60502 916 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 GPR32O75388 356 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 TMOD1P28289 359 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 JAK3P52333 1124 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 COL19A1Q14993 1142 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 NPY5RQ15761 445 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 KIZQ2M2Z5 673 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 LRCH2Q5VUJ6 765 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 MOXD1Q6UVY6 613 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 ZNF710Q8N1W2 664 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 RDM1Q8NG50 284 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.24■□□□□ 0.19
COL2A1-209ENST00000546974 NEK9Q8TD19 979 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 PABPC5Q96DU9 382 aaKnown RBP16.24■□□□□ 0.19
COL2A1-209ENST00000546974 RGS18Q9NS28 235 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 C1orf112Q9NSG2 853 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 LRFN2Q9ULH4 789 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 PCDHB7Q9Y5E2 793 aa16.24■□□□□ 0.19
COL2A1-209ENST00000546974 MRPL42Q9Y6G3 142 aaKnown RBP16.24■□□□□ 0.19
COL2A1-209ENST00000546974 DENND3A2RUS2 1198 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 PSMD10O75832 226 aa16.23■□□□□ 0.19
COL2A1-209ENST00000546974 CDKL5O76039 1030 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms