RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 RSPH10B2B2RC85 870 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 SLC26A4O43511 780 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 BRD1O95696 1058 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 CXCL10P02778 98 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 RSPH10BP0C881 870 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 YWHABP31946 246 aaKnown RBP16.2■□□□□ 0.18
DDX54-203ENST00000546869 THPOP40225 353 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 CCL23P55773 120 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 CTTNQ14247 550 aaKnown RBP16.2■□□□□ 0.18
DDX54-203ENST00000546869 SLC39A14Q15043 492 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 RUFY4Q6ZNE9 571 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 KIAA0319LQ8IZA0 1049 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 TRAPPC12Q8WVT3 735 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 AK8Q96MA6 479 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 ZNF396Q96N95 335 aaPredicted RBP16.2■□□□□ 0.18
DDX54-203ENST00000546869 JPH2Q9BR39 696 aaPredicted RBP16.2■□□□□ 0.18
DDX54-203ENST00000546869 UBE2OQ9C0C9 1292 aaKnown RBP16.2■□□□□ 0.18
DDX54-203ENST00000546869 CYP26B1Q9NR63 512 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 SQORQ9Y6N5 450 aa16.2■□□□□ 0.18
DDX54-203ENST00000546869 LTBP2Q14767 1821 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 CEP290O15078 2479 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 MAFO75444 373 aaPredicted RBP16.19■□□□□ 0.18
DDX54-203ENST00000546869 MED24O75448 989 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 TMOD1P28289 359 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 LONP1P36776 959 aaKnown RBP16.19■□□□□ 0.18
DDX54-203ENST00000546869 NASPP49321 788 aaPredicted RBP16.19■□□□□ 0.18
DDX54-203ENST00000546869 CDC42EP1Q00587 391 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 CYP4A11Q02928 519 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 TBC1D8BQ0IIM8 1120 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 GPNMBQ14956 572 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 IER5Q5VY09 327 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 FAM173BQ6P4H8 233 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 CHRDL2Q6WN34 429 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 C16orf59Q7L2K0 433 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 DNAJB3Q8WWF6 145 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 VWCEQ96DN2 955 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 NACC1Q96RE7 527 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 SEPT9Q9UHD8 586 aaPredicted RBP16.19■□□□□ 0.18
DDX54-203ENST00000546869 CLIC4Q9Y696 253 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 KDM3AQ9Y4C1 1321 aa16.19■□□□□ 0.18
DDX54-203ENST00000546869 RFC5P40937 340 aa16.18■□□□□ 0.18
DDX54-203ENST00000546869 MGAT3Q09327 533 aa16.18■□□□□ 0.18
DDX54-203ENST00000546869 PKP1Q13835 747 aa16.18■□□□□ 0.18
DDX54-203ENST00000546869 HYIQ5T013 277 aa16.18■□□□□ 0.18
DDX54-203ENST00000546869 KRT79Q5XKE5 535 aa16.18■□□□□ 0.18
DDX54-203ENST00000546869 PSRC1Q6PGN9 363 aaPredicted RBP16.18■□□□□ 0.18
DDX54-203ENST00000546869 TRMT1LQ7Z2T5 733 aaKnown RBP16.18■□□□□ 0.18
DDX54-203ENST00000546869 SCLYQ96I15 445 aa16.18■□□□□ 0.18
DDX54-203ENST00000546869 CEP170P1Q96L14 293 aa16.18■□□□□ 0.18
DDX54-203ENST00000546869 USP28Q96RU2 1077 aa16.18■□□□□ 0.18
DDX54-203ENST00000546869 DHX33Q9H6R0 707 aaKnown RBP16.18■□□□□ 0.18
DDX54-203ENST00000546869 DBR1Q9UK59 544 aaKnown RBP16.18■□□□□ 0.18
DDX54-203ENST00000546869 COLQQ9Y215 455 aaPredicted RBP16.18■□□□□ 0.18
DDX54-203ENST00000546869 ZDHHC9Q9Y397 364 aa16.18■□□□□ 0.18
DDX54-203ENST00000546869 SRPRBQ9Y5M8 271 aaKnown RBP16.18■□□□□ 0.18
DDX54-203ENST00000546869 MYH9P35579 1960 aaKnown RBP16.17■□□□□ 0.18
DDX54-203ENST00000546869 VWA3AA6NCI4 1184 aa16.17■□□□□ 0.18
DDX54-203ENST00000546869 GAS2O43903 313 aaKnown RBP16.17■□□□□ 0.18
DDX54-203ENST00000546869 CHRNA1P02708 482 aa16.17■□□□□ 0.18
DDX54-203ENST00000546869 DDIT3P35638 169 aa16.17■□□□□ 0.18
DDX54-203ENST00000546869 EPHB4P54760 987 aa16.17■□□□□ 0.18
DDX54-203ENST00000546869 MRPS6P82932 125 aaKnown RBP16.17■□□□□ 0.18
DDX54-203ENST00000546869 MTERF2Q49AM1 385 aa16.17■□□□□ 0.18
DDX54-203ENST00000546869 TMEM240Q5SV17 173 aa16.17■□□□□ 0.18
DDX54-203ENST00000546869 EFCAB12Q6NXP0 572 aa16.17■□□□□ 0.18
DDX54-203ENST00000546869 TDHQ8IZJ6 230 aa16.17■□□□□ 0.18
DDX54-203ENST00000546869 MMTAG2Q9BU76 263 aaKnown RBP16.17■□□□□ 0.18
DDX54-203ENST00000546869 KAT6AQ92794 2004 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 ZBTB39O15060 712 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 NBNO60934 754 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 DGAT1O75907 488 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 FGBP02675 491 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 CCT6AP40227 531 aaKnown RBP16.16■□□□□ 0.18
DDX54-203ENST00000546869 RARRES1P49788 294 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 DNM2P50570 870 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 NPEPPSP55786 919 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 MBTPS1Q14703 1052 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 RASIP1Q5U651 963 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 USP38Q8NB14 1042 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 LINC00301Q8NCQ3 95 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 SNX29Q8TEQ0 813 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 SLC7A3Q8WY07 619 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 ZBTB10Q96DT7 871 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.16■□□□□ 0.18
DDX54-203ENST00000546869 CELF4Q9BZC1 486 aaKnown RBP16.16■□□□□ 0.18
DDX54-203ENST00000546869 NT5C3AQ9H0P0 336 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 CFAP45Q9UL16 551 aa16.16■□□□□ 0.18
DDX54-203ENST00000546869 TRIP12Q14669 1992 aaPredicted RBP16.15■□□□□ 0.18
DDX54-203ENST00000546869 TMEM150BA6NC51 233 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 M0QZ92 97 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 PPP6R2O75170 966 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 YEATS4O95619 227 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 NUCB2P80303 420 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 MKRN4PQ13434 485 aaPredicted RBP16.15■□□□□ 0.18
DDX54-203ENST00000546869 XKR9Q5GH70 373 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 PLA2G4FQ68DD2 849 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 ZNF365Q70YC5 407 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 METTL13Q8N6R0 699 aa16.15■□□□□ 0.18
DDX54-203ENST00000546869 ZNF579Q8NAF0 562 aaKnown RBP16.15■□□□□ 0.18
DDX54-203ENST00000546869 HERVK_113Q902F9 699 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms