RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 SLFN13Q68D06 897 aa8.29□□□□□ -1.08
CPNE8-204ENST00000546603 GPR155Q7Z3F1 870 aa8.29□□□□□ -1.08
CPNE8-204ENST00000546603 KIF18BQ86Y91 864 aa8.29□□□□□ -1.08
CPNE8-204ENST00000546603 SCYL1Q96KG9 808 aa8.29□□□□□ -1.08
CPNE8-204ENST00000546603 KRTAP4-7Q9BYR0 210 aa8.29□□□□□ -1.08
CPNE8-204ENST00000546603 PCIF1Q9H4Z3 704 aa8.29□□□□□ -1.08
CPNE8-204ENST00000546603 PPP4R1LQ9P1A2 415 aa8.29□□□□□ -1.08
CPNE8-204ENST00000546603 PLAAQ9Y263 795 aa8.29□□□□□ -1.08
CPNE8-204ENST00000546603 POU3F2P20265 443 aaPredicted RBP8.28□□□□□ -1.08
CPNE8-204ENST00000546603 NEK4P51957 841 aa8.28□□□□□ -1.08
CPNE8-204ENST00000546603 CD83Q01151 205 aa8.28□□□□□ -1.08
CPNE8-204ENST00000546603 ZNF827Q17R98 1081 aa8.28□□□□□ -1.08
CPNE8-204ENST00000546603 ZNF568Q3ZCX4 644 aa8.28□□□□□ -1.08
CPNE8-204ENST00000546603 KANK2Q63ZY3 851 aa8.28□□□□□ -1.08
CPNE8-204ENST00000546603 OTOP2Q7RTS6 562 aa8.28□□□□□ -1.08
CPNE8-204ENST00000546603 LRRTM3Q86VH5 581 aa8.28□□□□□ -1.08
CPNE8-204ENST00000546603 NIM1KQ8IY84 436 aa8.28□□□□□ -1.08
CPNE8-204ENST00000546603 ERCC4Q92889 916 aaPredicted RBP8.28□□□□□ -1.08
CPNE8-204ENST00000546603 SAMD11Q96NU1 681 aa8.28□□□□□ -1.08
CPNE8-204ENST00000546603 SSBP3Q9BWW4 388 aaPredicted RBP8.28□□□□□ -1.08
CPNE8-204ENST00000546603 SEC61A2Q9H9S3 476 aa8.28□□□□□ -1.08
CPNE8-204ENST00000546603 ZKSCAN5Q9Y2L8 839 aa8.28□□□□□ -1.08
CPNE8-204ENST00000546603 DVL2O14641 736 aa8.27□□□□□ -1.09
CPNE8-204ENST00000546603 HMGCRP04035 888 aa8.27□□□□□ -1.09
CPNE8-204ENST00000546603 APEX1P27695 318 aaKnown RBP8.27□□□□□ -1.09
CPNE8-204ENST00000546603 ADCY8P40145 1251 aa8.27□□□□□ -1.09
CPNE8-204ENST00000546603 EIF4HQ15056 248 aaKnown RBP8.27□□□□□ -1.09
CPNE8-204ENST00000546603 ZMAT1Q5H9K5 638 aa8.27□□□□□ -1.09
CPNE8-204ENST00000546603 LIMS2Q7Z4I7 341 aa8.27□□□□□ -1.09
CPNE8-204ENST00000546603 RTN4RL1Q86UN2 441 aaPredicted RBP8.27□□□□□ -1.09
CPNE8-204ENST00000546603 KIAA1958Q8N8K9 716 aa8.27□□□□□ -1.09
CPNE8-204ENST00000546603 FOXRED1Q96CU9 486 aaPredicted RBP8.27□□□□□ -1.09
CPNE8-204ENST00000546603 FOXB1Q99853 325 aa8.27□□□□□ -1.09
CPNE8-204ENST00000546603 A0A0G2JNJ9 132 aa8.26□□□□□ -1.09
CPNE8-204ENST00000546603 ZNF888P0CJ79 500 aaPredicted RBP8.26□□□□□ -1.09
CPNE8-204ENST00000546603 KCNQ1P51787 676 aa8.26□□□□□ -1.09
CPNE8-204ENST00000546603 ALDH6A1Q02252 535 aaKnown RBP8.26□□□□□ -1.09
CPNE8-204ENST00000546603 MOGSQ13724 837 aa8.26□□□□□ -1.09
CPNE8-204ENST00000546603 CNNM4Q6P4Q7 775 aa8.26□□□□□ -1.09
CPNE8-204ENST00000546603 KIAA0907Q7Z7F0 614 aaPredicted RBP8.26□□□□□ -1.09
CPNE8-204ENST00000546603 NME9Q86XW9 330 aa8.26□□□□□ -1.09
CPNE8-204ENST00000546603 TTC9BQ8N6N2 239 aa8.26□□□□□ -1.09
CPNE8-204ENST00000546603 LOXL4Q96JB6 756 aa8.26□□□□□ -1.09
CPNE8-204ENST00000546603 IFT57Q9NWB7 429 aa8.26□□□□□ -1.09
CPNE8-204ENST00000546603 Q9UFV3 132 aa8.26□□□□□ -1.09
CPNE8-204ENST00000546603 ENPP3O14638 875 aa8.25□□□□□ -1.09
CPNE8-204ENST00000546603 KPNA6O60684 536 aa8.25□□□□□ -1.09
CPNE8-204ENST00000546603 GAS7O60861 476 aa8.25□□□□□ -1.09
CPNE8-204ENST00000546603 MAFO75444 373 aaPredicted RBP8.25□□□□□ -1.09
CPNE8-204ENST00000546603 CNOT4O95628 575 aaKnown RBP8.25□□□□□ -1.09
CPNE8-204ENST00000546603 MAGEA10P43363 369 aaPredicted RBP8.25□□□□□ -1.09
CPNE8-204ENST00000546603 MAP3K12Q12852 859 aa8.25□□□□□ -1.09
CPNE8-204ENST00000546603 DALRD3Q5D0E6 543 aaKnown RBP8.25□□□□□ -1.09
CPNE8-204ENST00000546603 TMEM200BQ69YZ2 307 aa8.25□□□□□ -1.09
CPNE8-204ENST00000546603 GRAMD4Q6IC98 578 aa8.25□□□□□ -1.09
CPNE8-204ENST00000546603 CIR1Q86X95 450 aaPredicted RBP8.25□□□□□ -1.09
CPNE8-204ENST00000546603 DHX37Q8IY37 1157 aaKnown RBP8.25□□□□□ -1.09
CPNE8-204ENST00000546603 AHI1Q8N157 1196 aa8.25□□□□□ -1.09
CPNE8-204ENST00000546603 PPM1KQ8N3J5 372 aa8.25□□□□□ -1.09
CPNE8-204ENST00000546603 SMPD4Q9NXE4 827 aa8.25□□□□□ -1.09
CPNE8-204ENST00000546603 PTPN22Q9Y2R2 807 aa8.25□□□□□ -1.09
CPNE8-204ENST00000546603 F2P00734 622 aa8.24□□□□□ -1.09
CPNE8-204ENST00000546603 ROM1Q03395 351 aa8.24□□□□□ -1.09
CPNE8-204ENST00000546603 MFSD3Q96ES6 412 aa8.24□□□□□ -1.09
CPNE8-204ENST00000546603 LMF1Q96S06 567 aa8.24□□□□□ -1.09
CPNE8-204ENST00000546603 MTFR1LQ9H019 292 aa8.24□□□□□ -1.09
CPNE8-204ENST00000546603 CDC42EP3Q9UKI2 254 aa8.24□□□□□ -1.09
CPNE8-204ENST00000546603 TBX22Q9Y458 520 aa8.24□□□□□ -1.09
CPNE8-204ENST00000546603 SPO11Q9Y5K1 396 aa8.24□□□□□ -1.09
CPNE8-204ENST00000546603 UBA6A0AVT1 1052 aaPredicted RBP8.23□□□□□ -1.09
CPNE8-204ENST00000546603 SLC9A1P19634 815 aa8.23□□□□□ -1.09
CPNE8-204ENST00000546603 RRADP55042 308 aa8.23□□□□□ -1.09
CPNE8-204ENST00000546603 ADCY1Q08828 1119 aa8.23□□□□□ -1.09
CPNE8-204ENST00000546603 EPHA7Q15375 998 aa8.23□□□□□ -1.09
CPNE8-204ENST00000546603 TAF7LQ5H9L4 462 aa8.23□□□□□ -1.09
CPNE8-204ENST00000546603 TRIM68Q6AZZ1 485 aa8.23□□□□□ -1.09
CPNE8-204ENST00000546603 CHST13Q8NET6 341 aa8.23□□□□□ -1.09
CPNE8-204ENST00000546603 MAML3Q96JK9 1138 aa8.23□□□□□ -1.09
CPNE8-204ENST00000546603 C16orf92Q96LL3 132 aa8.23□□□□□ -1.09
CPNE8-204ENST00000546603 PTPN18Q99952 460 aa8.23□□□□□ -1.09
CPNE8-204ENST00000546603 MEGF9Q9H1U4 602 aa8.23□□□□□ -1.09
CPNE8-204ENST00000546603 OXSMQ9NWU1 459 aa8.23□□□□□ -1.09
CPNE8-204ENST00000546603 TLDC2A0PJX2 215 aa8.22□□□□□ -1.09
CPNE8-204ENST00000546603 FAM83GA6ND36 823 aa8.22□□□□□ -1.09
CPNE8-204ENST00000546603 GPR42O15529 346 aa8.22□□□□□ -1.09
CPNE8-204ENST00000546603 PRLP01236 227 aa8.22□□□□□ -1.09
CPNE8-204ENST00000546603 ADRB1P08588 477 aa8.22□□□□□ -1.09
CPNE8-204ENST00000546603 ATP2A2P16615 1042 aaKnown RBP8.22□□□□□ -1.09
CPNE8-204ENST00000546603 MEOX1P50221 254 aa8.22□□□□□ -1.09
CPNE8-204ENST00000546603 RAC3P60763 192 aa8.22□□□□□ -1.09
CPNE8-204ENST00000546603 SLC6A3Q01959 620 aa8.22□□□□□ -1.09
CPNE8-204ENST00000546603 TTC38Q5R3I4 469 aa8.22□□□□□ -1.09
CPNE8-204ENST00000546603 ELF4Q99607 663 aaPredicted RBP8.22□□□□□ -1.09
CPNE8-204ENST00000546603 PTX3P26022 381 aaPredicted RBP8.21□□□□□ -1.1
CPNE8-204ENST00000546603 PLEKHG4Q58EX7 1191 aa8.21□□□□□ -1.1
CPNE8-204ENST00000546603 SLFN12LQ6IEE8 588 aa8.21□□□□□ -1.1
CPNE8-204ENST00000546603 LARP4Q71RC2 724 aaKnown RBP eCLIP8.21□□□□□ -1.1
CPNE8-204ENST00000546603 PASD1Q8IV76 773 aa8.21□□□□□ -1.1
CPNE8-204ENST00000546603 ZZZ3Q8IYH5 903 aa8.21□□□□□ -1.1
CPNE8-204ENST00000546603 RTKN2Q8IZC4 609 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms