RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PSMC5P62195 406 aa17.68■□□□□ 0.42
CCDC78-216ENST00000544996 LPIN1Q14693 890 aa17.68■□□□□ 0.42
CCDC78-216ENST00000544996 CALCRLQ16602 461 aa17.68■□□□□ 0.42
CCDC78-216ENST00000544996 UGCGQ16739 394 aa17.68■□□□□ 0.42
CCDC78-216ENST00000544996 TCTN1Q2MV58 587 aa17.68■□□□□ 0.42
CCDC78-216ENST00000544996 XKR3Q5GH77 459 aa17.68■□□□□ 0.42
CCDC78-216ENST00000544996 FBXO47Q5MNV8 452 aa17.68■□□□□ 0.42
CCDC78-216ENST00000544996 PPP2R2DQ66LE6 453 aa17.68■□□□□ 0.42
CCDC78-216ENST00000544996 KIAA0319LQ8IZA0 1049 aa17.68■□□□□ 0.42
CCDC78-216ENST00000544996 CELF4Q9BZC1 486 aaKnown RBP17.68■□□□□ 0.42
CCDC78-216ENST00000544996 PCDHA12Q9UN75 941 aa17.68■□□□□ 0.42
CCDC78-216ENST00000544996 LAMA2P24043 3122 aaKnown RBP17.67■□□□□ 0.42
CCDC78-216ENST00000544996 CD2BP2O95400 341 aaKnown RBP17.67■□□□□ 0.42
CCDC78-216ENST00000544996 MYOGP15173 224 aa17.67■□□□□ 0.42
CCDC78-216ENST00000544996 ATP2B1P20020 1258 aa17.67■□□□□ 0.42
CCDC78-216ENST00000544996 TMOD1P28289 359 aa17.67■□□□□ 0.42
CCDC78-216ENST00000544996 DEFB103AP81534 67 aa17.67■□□□□ 0.42
CCDC78-216ENST00000544996 TSHZ1Q6ZSZ6 1077 aa17.67■□□□□ 0.42
CCDC78-216ENST00000544996 BANK1Q8NDB2 785 aa17.67■□□□□ 0.42
CCDC78-216ENST00000544996 OSBPL7Q9BZF2 842 aa17.67■□□□□ 0.42
CCDC78-216ENST00000544996 SEPT9Q9UHD8 586 aaPredicted RBP17.67■□□□□ 0.42
CCDC78-216ENST00000544996 KAT6AQ92794 2004 aa17.66■□□□□ 0.42
CCDC78-216ENST00000544996 EML1O00423 815 aa17.66■□□□□ 0.42
CCDC78-216ENST00000544996 GJB5O95377 273 aa17.66■□□□□ 0.42
CCDC78-216ENST00000544996 P4HBP07237 508 aaKnown RBP17.66■□□□□ 0.42
CCDC78-216ENST00000544996 CA3P07451 260 aa17.66■□□□□ 0.42
CCDC78-216ENST00000544996 QARSP47897 775 aaKnown RBP17.66■□□□□ 0.42
CCDC78-216ENST00000544996 TBC1D8BQ0IIM8 1120 aa17.66■□□□□ 0.42
CCDC78-216ENST00000544996 GRIN2CQ14957 1233 aa17.66■□□□□ 0.42
CCDC78-216ENST00000544996 EPHA7Q15375 998 aa17.66■□□□□ 0.42
CCDC78-216ENST00000544996 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.66■□□□□ 0.42
CCDC78-216ENST00000544996 NOSTRINQ8IVI9 506 aa17.66■□□□□ 0.42
CCDC78-216ENST00000544996 MYOCDQ8IZQ8 938 aa17.66■□□□□ 0.42
CCDC78-216ENST00000544996 MAP7D2Q96T17 732 aa17.66■□□□□ 0.42
CCDC78-216ENST00000544996 NIFKQ9BYG3 293 aaKnown RBP17.66■□□□□ 0.42
CCDC78-216ENST00000544996 GINS2Q9Y248 185 aa17.66■□□□□ 0.42
CCDC78-216ENST00000544996 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.66■□□□□ 0.42
CCDC78-216ENST00000544996 KDM3AQ9Y4C1 1321 aa17.66■□□□□ 0.42
CCDC78-216ENST00000544996 DDX11L8A8MPP1 907 aa17.65■□□□□ 0.42
CCDC78-216ENST00000544996 MCM7P33993 719 aa17.65■□□□□ 0.42
CCDC78-216ENST00000544996 ORC2Q13416 577 aaPredicted RBP17.65■□□□□ 0.42
CCDC78-216ENST00000544996 NCAPH2Q6IBW4 605 aa17.65■□□□□ 0.42
CCDC78-216ENST00000544996 EFCAB12Q6NXP0 572 aa17.65■□□□□ 0.42
CCDC78-216ENST00000544996 TMCO2Q7Z6W1 182 aaPredicted RBP17.65■□□□□ 0.42
CCDC78-216ENST00000544996 ZNF710Q8N1W2 664 aa17.65■□□□□ 0.42
CCDC78-216ENST00000544996 RAD9AQ99638 391 aa17.65■□□□□ 0.42
CCDC78-216ENST00000544996 TTC12Q9H892 705 aaPredicted RBP17.65■□□□□ 0.42
CCDC78-216ENST00000544996 SUGCTQ9HAC7 445 aa17.65■□□□□ 0.42
CCDC78-216ENST00000544996 NOL7Q9UMY1 257 aaKnown RBP17.65■□□□□ 0.42
CCDC78-216ENST00000544996 FOSL2P15408 326 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 CD52P31358 61 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 TXKP42681 527 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 TRAPPC10P48553 1259 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 PAK2Q13177 524 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 MKRN4PQ13434 485 aaPredicted RBP17.64■□□□□ 0.41
CCDC78-216ENST00000544996 MTERF2Q49AM1 385 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 ODR4Q5SWX8 454 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 FAM117BQ6P1L5 589 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 FAM43BQ6ZT52 329 aaPredicted RBP17.64■□□□□ 0.41
CCDC78-216ENST00000544996 TET1Q8NFU7 2136 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 MYLIPQ8WY64 445 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 FTHL17Q9BXU8 183 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 AGO3Q9H9G7 860 aaKnown RBP17.64■□□□□ 0.41
CCDC78-216ENST00000544996 PADI3Q9ULW8 664 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 SMC3Q9UQE7 1217 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 AKT3Q9Y243 479 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 INSL6Q9Y581 213 aa17.64■□□□□ 0.41
CCDC78-216ENST00000544996 H3BQV1 296 aa17.63■□□□□ 0.41
CCDC78-216ENST00000544996 WNT7AO00755 349 aa17.63■□□□□ 0.41
CCDC78-216ENST00000544996 VTNP04004 478 aa17.63■□□□□ 0.41
CCDC78-216ENST00000544996 U2AF2P26368 475 aaKnown RBP eCLIP17.63■□□□□ 0.41
CCDC78-216ENST00000544996 GJB2P29033 226 aa17.63■□□□□ 0.41
CCDC78-216ENST00000544996 DNM2P50570 870 aa17.63■□□□□ 0.41
CCDC78-216ENST00000544996 CLCN3P51790 818 aa17.63■□□□□ 0.41
CCDC78-216ENST00000544996 CRYBB1P53674 252 aaPredicted RBP17.63■□□□□ 0.41
CCDC78-216ENST00000544996 SPIRE1Q08AE8 756 aa17.63■□□□□ 0.41
CCDC78-216ENST00000544996 TARBP2Q15633 366 aaKnown RBP17.63■□□□□ 0.41
CCDC78-216ENST00000544996 KIZQ2M2Z5 673 aa17.63■□□□□ 0.41
CCDC78-216ENST00000544996 LRRC71Q8N4P6 559 aa17.63■□□□□ 0.41
CCDC78-216ENST00000544996 TOP1MTQ969P6 601 aa17.63■□□□□ 0.41
CCDC78-216ENST00000544996 MTMR9Q96QG7 549 aa17.63■□□□□ 0.41
CCDC78-216ENST00000544996 GAS2L1Q99501 681 aaPredicted RBP17.63■□□□□ 0.41
CCDC78-216ENST00000544996 LXNQ9BS40 222 aa17.63■□□□□ 0.41
CCDC78-216ENST00000544996 ZSWIM4Q9H7M6 989 aa17.63■□□□□ 0.41
CCDC78-216ENST00000544996 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.62■□□□□ 0.41
CCDC78-216ENST00000544996 RPS6KA5O75582 802 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 UPP2O95045 317 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 STBD1O95210 358 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 CDC42EP1Q00587 391 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 ZNF174Q15697 407 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 TTC38Q5R3I4 469 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 MCTP1Q6DN14 999 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 ANO5Q75V66 913 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 OTUD6AQ7L8S5 288 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 TPH2Q8IWU9 490 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 C4orf19Q8IY42 314 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 EXOC8Q8IYI6 725 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 JPH2Q9BR39 696 aaPredicted RBP17.62■□□□□ 0.41
CCDC78-216ENST00000544996 PRDM12Q9H4Q4 367 aa17.62■□□□□ 0.41
CCDC78-216ENST00000544996 RGL1Q9NZL6 768 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms