RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	ZSWIM3	Q96MP5	696 aa		5.88	□□□□□ -1.47
RAP1B-231	ENST00000544639	CLIC6	Q96NY7	704 aa		5.88	□□□□□ -1.47
RAP1B-231	ENST00000544639	AMN	Q9BXJ7	453 aa		5.88	□□□□□ -1.47
RAP1B-231	ENST00000544639	UCKL1	Q9NWZ5	548 aa		5.88	□□□□□ -1.47
RAP1B-231	ENST00000544639	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	UBA6	A0AVT1	1052 aa	Predicted RBP	5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	RFXAP	O00287	272 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	IL18BP	O95998	194 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	PRL	P01236	227 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	CD40	P25942	277 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	SESN3	P58005	492 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	ANAPC15	P60006	121 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	IGBP1	P78318	339 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	CAP1	Q01518	475 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	ALDH6A1	Q02252	535 aa	Known RBP	5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	DLX2	Q07687	328 aa	Predicted RBP	5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	ADCY1	Q08828	1119 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	VWA3B	Q502W6	1294 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	PHF19	Q5T6S3	580 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	LCE5A	Q5TCM9	118 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	BROX	Q5VW32	411 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	CLRN3	Q8NCR9	226 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	RTF1	Q92541	710 aa	Known RBP	5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	E2F7	Q96AV8	911 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	PWWP2A	Q96N64	755 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	FOXB1	Q99853	325 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	MS4A5	Q9H3V2	200 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	KCND1	Q9NSA2	647 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	SPATA6	Q9NWH7	488 aa	Predicted RBP	5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	GALNT8	Q9NY28	637 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	ARHGAP20	Q9P2F6	1191 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	ZFP69B	Q9UJL9	534 aa		5.87	□□□□□ -1.47
RAP1B-231	ENST00000544639	GLRB	P48167	497 aa		5.86	□□□□□ -1.47
RAP1B-231	ENST00000544639	CTSW	P56202	376 aa		5.86	□□□□□ -1.47
RAP1B-231	ENST00000544639	EVA1C	P58658	441 aa		5.86	□□□□□ -1.47
RAP1B-231	ENST00000544639	ZNF385B	Q569K4	471 aa		5.86	□□□□□ -1.47
RAP1B-231	ENST00000544639	TTC38	Q5R3I4	469 aa		5.86	□□□□□ -1.47
RAP1B-231	ENST00000544639	PRR31	Q5SQ13	230 aa		5.86	□□□□□ -1.47
RAP1B-231	ENST00000544639	IQSEC1	Q6DN90	963 aa		5.86	□□□□□ -1.47
RAP1B-231	ENST00000544639	LRSAM1	Q6UWE0	723 aa		5.86	□□□□□ -1.47
RAP1B-231	ENST00000544639	SAPCD2	Q86UD0	394 aa		5.86	□□□□□ -1.47
RAP1B-231	ENST00000544639	COG1	Q8WTW3	980 aa		5.86	□□□□□ -1.47
RAP1B-231	ENST00000544639	DACT3	Q96B18	629 aa	Predicted RBP	5.86	□□□□□ -1.47
RAP1B-231	ENST00000544639	IRF2BPL	Q9H1B7	796 aa		5.86	□□□□□ -1.47
RAP1B-231	ENST00000544639	USP36	Q9P275	1121 aa	Known RBP	5.86	□□□□□ -1.47
RAP1B-231	ENST00000544639	LCHN	A4D1U4	455 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	ALG1L2	C9J202	215 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	ECE1	P42892	770 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	SLC6A3	Q01959	620 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	STIL	Q15468	1287 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	RASSF3	Q86WH2	238 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	STPG3	Q8N7X2	389 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	C7orf31	Q8N865	590 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	ZCCHC14	Q8WYQ9	949 aa	Known RBP	5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	MAML3	Q96JK9	1138 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	TACO1	Q9BSH4	297 aa	Known RBP	5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	BTBD2	Q9BX70	525 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	ZDHHC5	Q9C0B5	715 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	VTA1	Q9NP79	307 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	PARD6A	Q9NPB6	346 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	SLC5A4	Q9NY91	659 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	CROT	Q9UKG9	612 aa		5.85	□□□□□ -1.47
RAP1B-231	ENST00000544639	KDM1A	O60341	852 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	CYP7B1	O75881	506 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	PRKD3	O94806	890 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	CHGB	P05060	677 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	COL6A1	P12109	1028 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	ZNF28	P17035	718 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	HOXA5	P20719	270 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	RPL13	P26373	211 aa	Known RBP	5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	AFF3	P51826	1226 aa	Known RBP	5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	GUCY2F	P51841	1108 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	MLLT6	P55198	1093 aa	Predicted RBP	5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	IL13RA1	P78552	427 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	ROM1	Q03395	351 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	FAM50A	Q14320	339 aa	Known RBP	5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	MYBPC3	Q14896	1274 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	KANK2	Q63ZY3	851 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	SLFN12L	Q6IEE8	588 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	PHYKPL	Q8IUZ5	450 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	ANKRD13A	Q8IZ07	590 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	CALML6	Q8TD86	181 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	ZNF526	Q8TF50	670 aa	Predicted RBP	5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	ZNF496	Q96IT1	587 aa	Predicted RBP	5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	PUS7L	Q9H0K6	701 aa	Known RBP	5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	OR10A5	Q9H207	317 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	SEMA4A	Q9H3S1	761 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	HOMER2	Q9NSB8	354 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	MSRA	Q9UJ68	235 aa		5.84	□□□□□ -1.47
RAP1B-231	ENST00000544639	SH3D21	A4FU49	640 aa		5.83	□□□□□ -1.48
RAP1B-231	ENST00000544639		K7ESF4	209 aa		5.83	□□□□□ -1.48
RAP1B-231	ENST00000544639	FFAR3	O14843	346 aa		5.83	□□□□□ -1.48
RAP1B-231	ENST00000544639	RAB11FIP3	O75154	756 aa		5.83	□□□□□ -1.48
RAP1B-231	ENST00000544639	MAF	O75444	373 aa	Predicted RBP	5.83	□□□□□ -1.48
RAP1B-231	ENST00000544639	FBXO21	O94952	628 aa		5.83	□□□□□ -1.48
RAP1B-231	ENST00000544639	KNG1	P01042	644 aa		5.83	□□□□□ -1.48
RAP1B-231	ENST00000544639	RGS3	P49796	1198 aa		5.83	□□□□□ -1.48
RAP1B-231	ENST00000544639	TCERG1L	Q5VWI1	586 aa		5.83	□□□□□ -1.48
RAP1B-231	ENST00000544639	PRAMEF9	Q5VWM5	478 aa		5.83	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms