RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 NID2Q14112 1375 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 MGEA5O60502 916 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 TBX10O75333 385 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 CDC45O75419 566 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 ZNF76P36508 570 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 SARSP49591 514 aaKnown RBP15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 PKN1Q16512 942 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 TMEM266Q2M3C6 531 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 ZNF484Q5JVG2 852 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 JAKMIP3Q5VZ66 844 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 EP400NLQ6ZTU2 488 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 PLA2G4DQ86XP0 818 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 FBXL16Q8N461 479 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 TMEM40Q8WWA1 233 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 NOC2LQ9Y3T9 749 aaKnown RBP15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 KIAA1671Q9BY89 1806 aa15.78■□□□□ 0.12
SEMA4D-224ENST00000544513 CCDC196A0A1B0GTZ2 297 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 DDX39AO00148 427 aaKnown RBP15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 BACH1O14867 736 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 LINC01565O15544 149 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 DCXO43602 365 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 C22orf31O95567 290 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 GATMP50440 423 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 MCTP2Q6DN12 878 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 SWSAP1Q6NVH7 229 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 MIS18BP1Q6P0N0 1132 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 PDXDC2PQ6P474 469 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 KLHL23Q8NBE8 558 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 MSLNLQ96KJ4 702 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 ZNF302Q9NR11 478 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 RGS18Q9NS28 235 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 TBC1D22BQ9NU19 505 aa15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 MAFBQ9Y5Q3 323 aaPredicted RBP15.77■□□□□ 0.12
SEMA4D-224ENST00000544513 PRPF3O43395 683 aaKnown RBP15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 MBTPS2O43462 519 aa15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 RPS6KA5O75582 802 aa15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 EYA4O95677 639 aa15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 CPA1P15085 419 aa15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 METAP2P50579 478 aaKnown RBP eCLIP15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 FAM189BP81408 668 aa15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 SMAD4Q13485 552 aaKnown RBP15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 PAN2Q504Q3 1202 aaKnown RBP15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 ZNF746Q6NUN9 644 aaPredicted RBP15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 SLC24A5Q71RS6 500 aa15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 SMAP1Q8IYB5 467 aaPredicted RBP15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 REXO1Q8N1G1 1221 aaKnown RBP15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 EFHBQ8N7U6 833 aa15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 BBXQ8WY36 941 aaPredicted RBP15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 ST3GAL5Q9UNP4 418 aa15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 EVPLQ92817 2033 aa15.76■□□□□ 0.11
SEMA4D-224ENST00000544513 C9IYK1 514 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 EDIL3O43854 480 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 GPR32O75388 356 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 CIITAP33076 1130 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 IRS1P35568 1242 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 CRYBB1P53674 252 aaPredicted RBP15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 SETQ01105 290 aaPredicted RBP15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 APOBRQ0VD83 1088 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 NFX1Q12986 1120 aaKnown RBP15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 CLUL1Q15846 466 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 NTRK3Q16288 839 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 Q6ZUG5 572 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 ADGRD2Q7Z7M1 963 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 CCDC12Q8WUD4 166 aaPredicted RBP15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 LENG9Q96B70 501 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 UIMC1Q96RL1 719 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 ADAM2Q99965 735 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 ZNF577Q9BSK1 485 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 AGXT2Q9BYV1 514 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 IGFLR1Q9H665 355 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 C6orf50Q9HD87 102 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 C1orf112Q9NSG2 853 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 CLEC1BQ9P126 229 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 CD207Q9UJ71 328 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 LRFN2Q9ULH4 789 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 PCDHB7Q9Y5E2 793 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 ZNF318Q5VUA4 2279 aa15.75■□□□□ 0.11
SEMA4D-224ENST00000544513 GPR182O15218 404 aa15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 COASYQ13057 564 aa15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 DSC3Q14574 896 aa15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 ODR4Q5SWX8 454 aa15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 LINC01465Q8N7H1 131 aa15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 POF1BQ8WVV4 589 aa15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 BRF1Q92994 677 aa15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 PPP2R3CQ969Q6 453 aa15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 POP1Q99575 1024 aaKnown RBP15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 UPF3BQ9BZI7 483 aaKnown RBP15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 RNF216Q9NWF9 866 aaPredicted RBP15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 GINS2Q9Y248 185 aa15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 PCDHA10Q9Y5I2 948 aa15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 SNX14Q9Y5W7 946 aa15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 MYH9P35579 1960 aaKnown RBP15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 FNDC1Q4ZHG4 1894 aaPredicted RBP15.74■□□□□ 0.11
SEMA4D-224ENST00000544513 DENND3A2RUS2 1198 aa15.73■□□□□ 0.11
SEMA4D-224ENST00000544513 PSAPP07602 524 aa15.73■□□□□ 0.11
SEMA4D-224ENST00000544513 GNA11P29992 359 aa15.73■□□□□ 0.11
SEMA4D-224ENST00000544513 HSPA4P34932 840 aa15.73■□□□□ 0.11
SEMA4D-224ENST00000544513 EVCP57679 992 aa15.73■□□□□ 0.11
SEMA4D-224ENST00000544513 FGD1P98174 961 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms