RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 NIFKQ9BYG3 293 aaKnown RBP15.24■□□□□ 0.03
SP140-213ENST00000543928 SCAND2PQ9GZW5 306 aaPredicted RBP15.24■□□□□ 0.03
SP140-213ENST00000543928 TUBE1Q9UJT0 475 aa15.24■□□□□ 0.03
SP140-213ENST00000543928 KIAA1024Q9UPX6 916 aa15.24■□□□□ 0.03
SP140-213ENST00000543928 CUTAO60888 179 aa15.23■□□□□ 0.03
SP140-213ENST00000543928 CYP2C9P11712 490 aa15.23■□□□□ 0.03
SP140-213ENST00000543928 MUTP22033 750 aa15.23■□□□□ 0.03
SP140-213ENST00000543928 MARCH8Q5T0T0 291 aa15.23■□□□□ 0.03
SP140-213ENST00000543928 USP49Q70CQ1 688 aa15.23■□□□□ 0.03
SP140-213ENST00000543928 OTUD6AQ7L8S5 288 aa15.23■□□□□ 0.03
SP140-213ENST00000543928 PIGOQ8TEQ8 1089 aa15.23■□□□□ 0.03
SP140-213ENST00000543928 SYMPKQ92797 1274 aaKnown RBP15.23■□□□□ 0.03
SP140-213ENST00000543928 ZBTB10Q96DT7 871 aa15.23■□□□□ 0.03
SP140-213ENST00000543928 EPSTI1Q96J88 318 aa15.23■□□□□ 0.03
SP140-213ENST00000543928 NACC1Q96RE7 527 aa15.23■□□□□ 0.03
SP140-213ENST00000543928 GDPD2Q9HCC8 539 aa15.23■□□□□ 0.03
SP140-213ENST00000543928 DDX19AQ9NUU7 478 aaKnown RBP15.23■□□□□ 0.03
SP140-213ENST00000543928 TMEM39AQ9NV64 488 aa15.23■□□□□ 0.03
SP140-213ENST00000543928 PCDHA7Q9UN72 937 aa15.23■□□□□ 0.03
SP140-213ENST00000543928 KDM3AQ9Y4C1 1321 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 MBLAC1A4D2B0 266 aaPredicted RBP15.22■□□□□ 0.03
SP140-213ENST00000543928 KLRC1P26715 233 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 NPEPPSP55786 919 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 GRB10Q13322 594 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 TARBP2Q15633 366 aaKnown RBP15.22■□□□□ 0.03
SP140-213ENST00000543928 XKR9Q5GH70 373 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 HYIQ5T013 277 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 AXDND1Q5T1B0 1012 aaPredicted RBP15.22■□□□□ 0.03
SP140-213ENST00000543928 MTHFD1LQ6UB35 978 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 SERINC5Q86VE9 423 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 ZNF579Q8NAF0 562 aaKnown RBP15.22■□□□□ 0.03
SP140-213ENST00000543928 RASSF8Q8NHQ8 419 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 CALML4Q96GE6 196 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 CDK5RAP3Q96JB5 506 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 CEP170P1Q96L14 293 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 CCDC43Q96MW1 224 aaKnown RBP15.22■□□□□ 0.03
SP140-213ENST00000543928 PNMA5Q96PV4 448 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 PLIN2Q99541 437 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 CCSER1Q9C0I3 900 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 PRDM5Q9NQX1 630 aaPredicted RBP15.22■□□□□ 0.03
SP140-213ENST00000543928 PDLIM7Q9NR12 457 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 CYP26B1Q9NR63 512 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 ANKEF1Q9NU02 776 aa15.22■□□□□ 0.03
SP140-213ENST00000543928 SLC26A4O43511 780 aa15.21■□□□□ 0.03
SP140-213ENST00000543928 C22orf31O95567 290 aa15.21■□□□□ 0.03
SP140-213ENST00000543928 XRCC6P12956 609 aaKnown RBP eCLIP15.21■□□□□ 0.03
SP140-213ENST00000543928 TXLNAP40222 546 aa15.21■□□□□ 0.03
SP140-213ENST00000543928 TBC1D8BQ0IIM8 1120 aa15.21■□□□□ 0.03
SP140-213ENST00000543928 PTK7Q13308 1070 aa15.21■□□□□ 0.03
SP140-213ENST00000543928 KARSQ15046 597 aaKnown RBP15.21■□□□□ 0.03
SP140-213ENST00000543928 RUFY4Q6ZNE9 571 aa15.21■□□□□ 0.03
SP140-213ENST00000543928 SH3RF1Q7Z6J0 888 aa15.21■□□□□ 0.03
SP140-213ENST00000543928 DHX38Q92620 1227 aaKnown RBP15.21■□□□□ 0.03
SP140-213ENST00000543928 CEP89Q96ST8 783 aa15.21■□□□□ 0.03
SP140-213ENST00000543928 NT5C3AQ9H0P0 336 aa15.21■□□□□ 0.03
SP140-213ENST00000543928 TBX21Q9UL17 535 aa15.21■□□□□ 0.03
SP140-213ENST00000543928 TRIM43BA6NCK2 446 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 E9PMD0 336 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 MAGEB2O15479 319 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 RARRES1P49788 294 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 MLLT1Q03111 559 aaPredicted RBP15.2■□□□□ 0.02
SP140-213ENST00000543928 TMEM119Q4V9L6 283 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 TAF2Q6P1X5 1199 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 SHC4Q6S5L8 630 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 KCNK18Q7Z418 384 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 METTL13Q8N6R0 699 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 WNT8BQ93098 351 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 TRIM43Q96BQ3 446 aaPredicted RBP15.2■□□□□ 0.02
SP140-213ENST00000543928 NOC4LQ9BVI4 516 aaKnown RBP15.2■□□□□ 0.02
SP140-213ENST00000543928 PPP1R12CQ9BZL4 782 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 FAM49AQ9H0Q0 323 aaPredicted RBP15.2■□□□□ 0.02
SP140-213ENST00000543928 CCDC39Q9UFE4 941 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 PRKAG2Q9UGJ0 569 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 DBR1Q9UK59 544 aaKnown RBP15.2■□□□□ 0.02
SP140-213ENST00000543928 DNM3Q9UQ16 869 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 PPME1Q9Y570 386 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 PCDHA2Q9Y5H9 948 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 NR2E3Q9Y5X4 410 aa15.2■□□□□ 0.02
SP140-213ENST00000543928 KIAA0355O15063 1070 aa15.19■□□□□ 0.02
SP140-213ENST00000543928 ABCB7O75027 752 aa15.19■□□□□ 0.02
SP140-213ENST00000543928 MAFO75444 373 aaPredicted RBP15.19■□□□□ 0.02
SP140-213ENST00000543928 EYA4O95677 639 aa15.19■□□□□ 0.02
SP140-213ENST00000543928 PLCG1P19174 1290 aa15.19■□□□□ 0.02
SP140-213ENST00000543928 BFSP2Q13515 415 aa15.19■□□□□ 0.02
SP140-213ENST00000543928 TRIM71Q2Q1W2 868 aaKnown RBP15.19■□□□□ 0.02
SP140-213ENST00000543928 EFCAB12Q6NXP0 572 aa15.19■□□□□ 0.02
SP140-213ENST00000543928 POTEHQ6S545 545 aa15.19■□□□□ 0.02
SP140-213ENST00000543928 LRRC71Q8N4P6 559 aa15.19■□□□□ 0.02
SP140-213ENST00000543928 KCTD17Q8N5Z5 321 aa15.19■□□□□ 0.02
SP140-213ENST00000543928 BHMT2Q9H2M3 363 aa15.19■□□□□ 0.02
SP140-213ENST00000543928 HIPK3Q9H422 1215 aa15.19■□□□□ 0.02
SP140-213ENST00000543928 SUGCTQ9HAC7 445 aa15.19■□□□□ 0.02
SP140-213ENST00000543928 BMP2KQ9NSY1 1161 aaPredicted RBP15.19■□□□□ 0.02
SP140-213ENST00000543928 ZMYND8Q9ULU4 1186 aaPredicted RBP15.19■□□□□ 0.02
SP140-213ENST00000543928 ARID2Q68CP9 1835 aa15.19■□□□□ 0.02
SP140-213ENST00000543928 EVPLQ92817 2033 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 SMIM35A0A1B0GVV1 85 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 ARHGEF35A5YM69 484 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 SYN1P17600 705 aa15.18■□□□□ 0.02
SP140-213ENST00000543928 THPOP40225 353 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms