RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ZC2HC1CQ53FD0 456 aaPredicted RBP18.75■□□□□ 0.59
PTPRO-209ENST00000543886 XRRA1Q6P2D8 792 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 REPS2Q8NFH8 660 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 CCDC43Q96MW1 224 aaKnown RBP18.75■□□□□ 0.59
PTPRO-209ENST00000543886 CDC23Q9UJX2 597 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 ZMYM2Q9UBW7 1377 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 CLIC2O15247 247 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 AKR1B10O60218 316 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 AKAP3O75969 853 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 VAV2P52735 878 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 HIRAP54198 1017 aaPredicted RBP18.75■□□□□ 0.59
PTPRO-209ENST00000543886 POLR2FP61218 127 aaKnown RBP18.75■□□□□ 0.59
PTPRO-209ENST00000543886 CYP27A1Q02318 531 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 DCAF17Q5H9S7 520 aaPredicted RBP18.75■□□□□ 0.59
PTPRO-209ENST00000543886 SFMBT2Q5VUG0 894 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 ZNF720Q7Z2F6 126 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 DBR1Q9UK59 544 aaKnown RBP18.75■□□□□ 0.59
PTPRO-209ENST00000543886 ADAMTS5Q9UNA0 930 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 MYH11P35749 1972 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 TGFB1I1O43294 461 aa18.74■□□□□ 0.59
PTPRO-209ENST00000543886 NOL4O94818 638 aa18.74■□□□□ 0.59
PTPRO-209ENST00000543886 JAK3P52333 1124 aa18.74■□□□□ 0.59
PTPRO-209ENST00000543886 KIF5AQ12840 1032 aa18.74■□□□□ 0.59
PTPRO-209ENST00000543886 HS2ST1Q7LGA3 356 aa18.74■□□□□ 0.59
PTPRO-209ENST00000543886 SYN2Q92777 582 aaPredicted RBP18.74■□□□□ 0.59
PTPRO-209ENST00000543886 PURBQ96QR8 312 aaKnown RBP18.74■□□□□ 0.59
PTPRO-209ENST00000543886 TFR2Q9UP52 801 aa18.74■□□□□ 0.59
PTPRO-209ENST00000543886 PCDHB13Q9Y5F0 798 aa18.74■□□□□ 0.59
PTPRO-209ENST00000543886 PPP1R12BO60237 982 aaPredicted RBP18.73■□□□□ 0.59
PTPRO-209ENST00000543886 KRT76Q01546 638 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 PRKG1Q13976 671 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 NFIL3Q16649 462 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 TCERG1LQ5VWI1 586 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 CATSPERGQ6ZRH7 1159 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 IFIH1Q9BYX4 1025 aaKnown RBP18.73■□□□□ 0.59
PTPRO-209ENST00000543886 ZNF214Q9UL59 606 aaPredicted RBP18.73■□□□□ 0.59
PTPRO-209ENST00000543886 WDR64B1ANS9 1081 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 USO1O60763 962 aaKnown RBP18.73■□□□□ 0.59
PTPRO-209ENST00000543886 LYPLA2O95372 231 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 SFNP31947 248 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 SLC9C1Q4G0N8 1177 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 UTP14CQ5TAP6 766 aaKnown RBP18.73■□□□□ 0.59
PTPRO-209ENST00000543886 FBXO38Q6PIJ6 1188 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 CEP112Q8N8E3 955 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 GOLGA1Q92805 767 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 FIZ1Q96SL8 496 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 TEX13BQ9BXU2 312 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 AFG3L2Q9Y4W6 797 aa18.73■□□□□ 0.59
PTPRO-209ENST00000543886 LCA5LO95447 670 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 PSMC2P35998 433 aaKnown RBP18.72■□□□□ 0.59
PTPRO-209ENST00000543886 CASP4P49662 377 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 RARRES1P49788 294 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 MAPK7Q13164 816 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 TMEM132BQ14DG7 1078 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 TDRD12Q587J7 1177 aaKnown RBP18.72■□□□□ 0.59
PTPRO-209ENST00000543886 NLRX1Q86UT6 975 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 GPIHBP1Q8IV16 184 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.72■□□□□ 0.59
PTPRO-209ENST00000543886 GOLGA5Q8TBA6 731 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 NSUN6Q8TEA1 469 aaKnown RBP18.72■□□□□ 0.59
PTPRO-209ENST00000543886 LACRTQ9GZZ8 138 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 PCDHA13Q9Y5I0 950 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 SSU72P8A0A1W2PR75 194 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 RCCD1A6NED2 376 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 K7ENM7 598 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 ZNF263O14978 683 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 ATP2A1O14983 1001 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 SERPING1P05155 500 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 NR3C2P08235 984 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 YWHABP31946 246 aaKnown RBP18.72■□□□□ 0.59
PTPRO-209ENST00000543886 MAPK8IP2Q13387 824 aaPredicted RBP18.72■□□□□ 0.59
PTPRO-209ENST00000543886 PLS1Q14651 629 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 TEX35Q5T0J7 233 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 MAEAQ7L5Y9 396 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 SRGAP1Q7Z6B7 1085 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 VSIG10LQ86VR7 867 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 KSR1Q8IVT5 923 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 FAM186BQ8IYM0 893 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 SYCP3Q8IZU3 236 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 UPF1Q92900 1129 aaKnown RBP eCLIP18.72■□□□□ 0.59
PTPRO-209ENST00000543886 GPRASP2Q96D09 838 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 GBP3Q9H0R5 595 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 GANQ9H2C0 597 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 ACAD9Q9H845 621 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 HOXC10Q9NYD6 342 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 LARSQ9P2J5 1176 aaKnown RBP18.72■□□□□ 0.59
PTPRO-209ENST00000543886 WDR90Q96KV7 1748 aa18.72■□□□□ 0.59
PTPRO-209ENST00000543886 ATP9AO75110 1047 aa18.71■□□□□ 0.59
PTPRO-209ENST00000543886 CHMP4BP1P59074 171 aa18.71■□□□□ 0.59
PTPRO-209ENST00000543886 PSMC5P62195 406 aa18.71■□□□□ 0.59
PTPRO-209ENST00000543886 RAPGEF1Q13905 1077 aa18.71■□□□□ 0.59
PTPRO-209ENST00000543886 EXOC3L4Q17RC7 722 aa18.71■□□□□ 0.59
PTPRO-209ENST00000543886 WHAMMP3Q1A5X7 153 aa18.71■□□□□ 0.59
PTPRO-209ENST00000543886 DAW1Q8N136 415 aa18.71■□□□□ 0.59
PTPRO-209ENST00000543886 TXLNBQ8N3L3 684 aa18.71■□□□□ 0.59
PTPRO-209ENST00000543886 MYPNQ86TC9 1320 aa18.71■□□□□ 0.59
PTPRO-209ENST00000543886 SRCAPQ6ZRS2 3230 aa18.71■□□□□ 0.58
PTPRO-209ENST00000543886 APBA1Q02410 837 aa18.7■□□□□ 0.58
PTPRO-209ENST00000543886 ALCAMQ13740 583 aa18.7■□□□□ 0.58
PTPRO-209ENST00000543886 C4orf19Q8IY42 314 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms