RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 WRNIP1Q96S55 665 aa17.93■□□□□ 0.46
COL4A1-204ENST00000543140 FHOD1Q9Y613 1164 aa17.93■□□□□ 0.46
COL4A1-204ENST00000543140 CAPN6Q9Y6Q1 641 aa17.93■□□□□ 0.46
COL4A1-204ENST00000543140 ZNF541Q9H0D2 1346 aa17.93■□□□□ 0.46
COL4A1-204ENST00000543140 FZD9O00144 591 aa17.93■□□□□ 0.46
COL4A1-204ENST00000543140 MOCS3O95396 460 aa17.93■□□□□ 0.46
COL4A1-204ENST00000543140 LCA5LO95447 670 aa17.93■□□□□ 0.46
COL4A1-204ENST00000543140 EPB41P11171 864 aaKnown RBP17.93■□□□□ 0.46
COL4A1-204ENST00000543140 ASTE1Q2TB18 679 aaPredicted RBP17.93■□□□□ 0.46
COL4A1-204ENST00000543140 ANGEL2Q5VTE6 544 aaKnown RBP17.93■□□□□ 0.46
COL4A1-204ENST00000543140 PCNX4Q63HM2 1172 aa17.93■□□□□ 0.46
COL4A1-204ENST00000543140 NOA1Q8NC60 698 aaKnown RBP17.93■□□□□ 0.46
COL4A1-204ENST00000543140 FIZ1Q96SL8 496 aa17.93■□□□□ 0.46
COL4A1-204ENST00000543140 TSGA10Q9BZW7 698 aa17.93■□□□□ 0.46
COL4A1-204ENST00000543140 GANQ9H2C0 597 aa17.93■□□□□ 0.46
COL4A1-204ENST00000543140 ANKZF1Q9H8Y5 726 aa17.93■□□□□ 0.46
COL4A1-204ENST00000543140 AGO4Q9HCK5 861 aaKnown RBP17.93■□□□□ 0.46
COL4A1-204ENST00000543140 RIPK3Q9Y572 518 aa17.93■□□□□ 0.46
COL4A1-204ENST00000543140 BCRP11274 1271 aa17.92■□□□□ 0.46
COL4A1-204ENST00000543140 ZNF720Q7Z2F6 126 aa17.92■□□□□ 0.46
COL4A1-204ENST00000543140 RMDN3Q96TC7 470 aa17.92■□□□□ 0.46
COL4A1-204ENST00000543140 JADE2Q9NQC1 790 aa17.92■□□□□ 0.46
COL4A1-204ENST00000543140 UBIAD1Q9Y5Z9 338 aa17.92■□□□□ 0.46
COL4A1-204ENST00000543140 VWA5AO00534 786 aa17.92■□□□□ 0.46
COL4A1-204ENST00000543140 ZNF185O15231 689 aa17.92■□□□□ 0.46
COL4A1-204ENST00000543140 ZBED4O75132 1171 aa17.92■□□□□ 0.46
COL4A1-204ENST00000543140 HIP1RO75146 1068 aa17.92■□□□□ 0.46
COL4A1-204ENST00000543140 SERPING1P05155 500 aa17.92■□□□□ 0.46
COL4A1-204ENST00000543140 PNMA6AP0CW24 399 aaPredicted RBP17.92■□□□□ 0.46
COL4A1-204ENST00000543140 PGM5Q15124 567 aa17.92■□□□□ 0.46
COL4A1-204ENST00000543140 TMEM150BA6NC51 233 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 EIF3DO15371 548 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL4A1-204ENST00000543140 ZRANB2O95218 330 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL4A1-204ENST00000543140 MUTP22033 750 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 BACE1P56817 501 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 BMS1Q14692 1282 aaKnown RBP17.91■□□□□ 0.46
COL4A1-204ENST00000543140 EXOC3L4Q17RC7 722 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 PAPD7Q5XG87 772 aaKnown RBP17.91■□□□□ 0.46
COL4A1-204ENST00000543140 CC2D1AQ6P1N0 951 aaPredicted RBP17.91■□□□□ 0.46
COL4A1-204ENST00000543140 PADI6Q6TGC4 694 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 RNF207Q6ZRF8 634 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 SLC35C1Q96A29 364 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 PNKPQ96T60 521 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL4A1-204ENST00000543140 NUCKS1Q9H1E3 243 aaKnown RBP17.91■□□□□ 0.46
COL4A1-204ENST00000543140 SALL4Q9UJQ4 1053 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 ZHX2Q9Y6X8 837 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 SSU72P8A0A1W2PR75 194 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 ATP9AO75110 1047 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 PON1P27169 355 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 CYP2J2P51589 502 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 ZNF131P52739 623 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 HMGCS2P54868 508 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 MAPK8IP2Q13387 824 aaPredicted RBP17.91■□□□□ 0.46
COL4A1-204ENST00000543140 DCAF15Q66K64 600 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 SCYL3Q8IZE3 742 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 SYN2Q92777 582 aaPredicted RBP17.91■□□□□ 0.46
COL4A1-204ENST00000543140 MMS19Q96T76 1030 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 PICK1Q9NRD5 415 aa17.91■□□□□ 0.46
COL4A1-204ENST00000543140 P4HBP07237 508 aaKnown RBP17.9■□□□□ 0.46
COL4A1-204ENST00000543140 PTPRAP18433 802 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 USP14P54578 494 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 DAW1Q8N136 415 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 KRT222Q8N1A0 295 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 METTL14Q9HCE5 456 aaKnown RBP17.9■□□□□ 0.46
COL4A1-204ENST00000543140 RNF216Q9NWF9 866 aaPredicted RBP17.9■□□□□ 0.46
COL4A1-204ENST00000543140 ODF2LQ9ULJ1 636 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 DOCK1Q14185 1865 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 TESPA1A2RU30 521 aaPredicted RBP17.9■□□□□ 0.46
COL4A1-204ENST00000543140 SLC16A3O15427 465 aaKnown RBP17.9■□□□□ 0.46
COL4A1-204ENST00000543140 UCHL3P15374 230 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 KLHL30Q0D2K2 578 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 MAPK7Q13164 816 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 ARHGEF16Q5VV41 709 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 DPY19L2P1Q6NXN4 242 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 ARHGAP27Q6ZUM4 889 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 FAM186BQ8IYM0 893 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 ZNF280CQ8ND82 737 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 TRPM4Q8TD43 1214 aa17.9■□□□□ 0.46
COL4A1-204ENST00000543140 COL11A1P12107 1806 aaPredicted RBP17.89■□□□□ 0.45
COL4A1-204ENST00000543140 BUB1O43683 1085 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 PRKG1Q13976 671 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 BAATQ14032 418 aaPredicted RBP17.89■□□□□ 0.45
COL4A1-204ENST00000543140 ASIC2Q16515 512 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 UTP14CQ5TAP6 766 aaKnown RBP17.89■□□□□ 0.45
COL4A1-204ENST00000543140 NIPA1Q7RTP0 329 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 NLGN2Q8NFZ4 835 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 SPAG5Q96R06 1193 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 RNF146Q9NTX7 359 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 GINM1Q9NU53 330 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 KCND2Q9NZV8 630 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 SEL1LQ9UBV2 794 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 ADAMTS1Q9UHI8 967 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 A0A087X0T9 212 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 TACC1O75410 805 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 FAM228BP0C875 321 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 GUCY2CP25092 1073 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 NAP1L1P55209 391 aaKnown RBP17.89■□□□□ 0.45
COL4A1-204ENST00000543140 GHRHRQ02643 423 aa17.89■□□□□ 0.45
COL4A1-204ENST00000543140 UGCGQ16739 394 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms