RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 ANKEF1Q9NU02 776 aa11.93□□□□□ -0.5
NPIPB3-210ENST00000542817 SETD4Q9NVD3 440 aa11.93□□□□□ -0.5
NPIPB3-210ENST00000542817 TCEAL9Q9UHQ7 104 aa11.93□□□□□ -0.5
NPIPB3-210ENST00000542817 DBR1Q9UK59 544 aaKnown RBP11.93□□□□□ -0.5
NPIPB3-210ENST00000542817 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
NPIPB3-210ENST00000542817 KBTBD13C9JR72 458 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 ARVCFO00192 962 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 POLR2DO15514 142 aaKnown RBP11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 HBP1O60381 514 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 EYA4O95677 639 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 CAPN2P17655 700 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 MCM4P33991 863 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 SOX10P56693 466 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 UBE2HP62256 183 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 DRP2Q13474 957 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 ZRSR1Q15695 479 aaKnown RBP11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 GRIK4Q16099 956 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 LRRC26Q2I0M4 334 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 C1orf53Q5VUE5 145 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 SLC39A5Q6ZMH5 540 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 C1orf186Q6ZWK4 172 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 SH3RF1Q7Z6J0 888 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 TNS4Q8IZW8 715 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 KCTD17Q8N5Z5 321 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 PDILTQ8N807 584 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 SYT2Q8N9I0 419 aaPredicted RBP11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 GPT2Q8TD30 523 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 RAD54LQ92698 747 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 GLT1D1Q96MS3 346 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 RUSC1Q9BVN2 902 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 KATNAL1Q9BW62 490 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 BHMT2Q9H2M3 363 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 DHX33Q9H6R0 707 aaKnown RBP11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 STARD7Q9NQZ5 370 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 CYP26B1Q9NR63 512 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 TRMT13Q9NUP7 481 aaKnown RBP11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 SEPT9Q9UHD8 586 aaPredicted RBP11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 GTF2IRD1Q9UHL9 959 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 ZNF215Q9UL58 517 aaPredicted RBP11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 TRIP12Q14669 1992 aaPredicted RBP11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 KDM3AQ9Y4C1 1321 aa11.92□□□□□ -0.5
NPIPB3-210ENST00000542817 A0A0U1RQG5 324 aaPredicted RBP11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 TREHO43280 583 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 MAFO75444 373 aaPredicted RBP11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 NR1I2O75469 434 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 CD4P01730 458 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 PLA2G4BP0C869 781 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 MDM2Q00987 491 aaPredicted RBP11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 PPFIA1Q13136 1202 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 MAPK7Q13164 816 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 MCM6Q14566 821 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 TRIM71Q2Q1W2 868 aaKnown RBP11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 MTERF2Q49AM1 385 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 ZNF484Q5JVG2 852 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 RINT1Q6NUQ1 792 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 RUFY4Q6ZNE9 571 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 DAW1Q8N136 415 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 DHX38Q92620 1227 aaKnown RBP11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 DHX58Q96C10 678 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 CALML4Q96GE6 196 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 FAM167AQ96KS9 214 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 GBP4Q96PP9 640 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 NT5C3AQ9H0P0 336 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 TRPV6Q9H1D0 765 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 C11orf49Q9H6J7 331 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 NRBP2Q9NSY0 501 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 KBTBD4Q9NVX7 518 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 DNM3Q9UQ16 869 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 NRCAMQ92823 1304 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 LAMA3Q16787 3333 aa11.91□□□□□ -0.5
NPIPB3-210ENST00000542817 B4GALT4O60513 344 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 DKC1O60832 514 aaKnown RBP eCLIP11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 CYP11B2P19099 503 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 ATN1P54259 1190 aaPredicted RBP11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 PTPN11Q06124 597 aaPredicted RBP11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 XKR9Q5GH70 373 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 RRAGBQ5VZM2 374 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 TRAF7Q6Q0C0 670 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 MTHFD1LQ6UB35 978 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 CCDC73Q6ZRK6 1079 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 ANKRD33Q7Z3H0 272 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 SERINC5Q86VE9 423 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 FAM126BQ8IXS8 530 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 GRAMD1CQ8IYS0 662 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 CEP170P1Q96L14 293 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 POLD4Q9HCU8 107 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 FAM13BQ9NYF5 915 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 STK17AQ9UEE5 414 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 SERTAD1Q9UHV2 236 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 COL1A2P08123 1366 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 ARID2Q68CP9 1835 aa11.9□□□□□ -0.5
NPIPB3-210ENST00000542817 NPHP3-ACAD11A0A0J9YXS1 232 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 C17orf102A2RUQ5 167 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 MYMKA6NI61 221 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 ZNF202O95125 648 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 SLFN14P0C7P3 912 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 KLRC1P26715 233 aa11.89□□□□□ -0.51
NPIPB3-210ENST00000542817 CASP1P29466 404 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms