RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 IQSEC1Q6DN90 963 aa13.74□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 TAPT1Q6NXT6 567 aa13.74□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 CATSPER3Q86XQ3 398 aa13.74□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 PDILTQ8N807 584 aa13.74□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 ATP6V0A1Q93050 837 aa13.74□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 PNMA5Q96PV4 448 aa13.74□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 SERTAD1Q9UHV2 236 aa13.74□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 DOCK5Q9H7D0 1870 aa13.74□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 EML1O00423 815 aa13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 CHMP2AO43633 222 aa13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 ATG7O95352 703 aa13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 CCNE2O96020 404 aa13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 PSAPP07602 524 aa13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 SPATA31C1P0DKV0 1188 aa13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 TXNP10599 105 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 XRCC6P12956 609 aaKnown RBP eCLIP13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 QARSP47897 775 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 LAMC2Q13753 1193 aa13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 ZSCAN23Q3MJ62 389 aa13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 CELF3Q5SZQ8 465 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 MIS18BP1Q6P0N0 1132 aa13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 EEPD1Q7L9B9 569 aa13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 LARP4BQ92615 738 aaKnown RBP13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 ZSWIM4Q9H7M6 989 aa13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 KBTBD4Q9NVX7 518 aa13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 PKD2L1Q9P0L9 805 aa13.73□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 MYH9P35579 1960 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 IGSF9BQ9UPX0 1349 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 POTEB3A0JP26 581 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 DDX39AO00148 427 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 MED24O75448 989 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 SLITRK3O94933 977 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 GGPS1O95749 300 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 GH1P01241 217 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 ZNF445P59923 1031 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 ACTR2P61160 394 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 PSMC5P62195 406 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 SP2Q02086 613 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 POSTNQ15063 836 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 DUSP28Q4G0W2 176 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 MFSD14CQ5VZR4 134 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 CNNM4Q6P4Q7 775 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 POTEBQ6S5H4 581 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 ABHD15Q6UXT9 468 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 C4orf19Q8IY42 314 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 RAD54LQ92698 747 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 PAGE5Q96GU1 130 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 NACC1Q96RE7 527 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 LXNQ9BS40 222 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 MLXIPQ9HAP2 919 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 CD320Q9NPF0 282 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 BLOC1S4Q9NUP1 217 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 KCND2Q9NZV8 630 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 DDX20Q9UHI6 824 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 KIAA1024Q9UPX6 916 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 DNM3Q9UQ16 869 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 Q9Y3F1 56 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 SAMM50Q9Y512 469 aa13.72□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 PKD1L2Q7Z442 2459 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 EMSYQ7Z589 1322 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 IGKV6D-21A0A0A0MT36 114 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 GRXCR1A8MXD5 290 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 GTPBP6O43824 516 aaPredicted RBP13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 SMC2O95347 1197 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 ARIH2O95376 493 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 SUPT20HL2P0C7V6 817 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 SLC26A2P50443 739 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 FPGSQ05932 587 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 ZRSR1Q15695 479 aaKnown RBP13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 NT5DC1Q5TFE4 455 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 SV2BQ7L1I2 683 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 CYFIP1Q7L576 1253 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 DHX37Q8IY37 1157 aaKnown RBP13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 TRIML1Q8N9V2 468 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 SPATA20Q8TB22 786 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 AFAP1L1Q8TED9 768 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 SEPT1Q8WYJ6 367 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 DYDC2Q96IM9 177 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 PHOX2BQ99453 314 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 PANK2Q9BZ23 570 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 GTPBP4Q9BZE4 634 aaKnown RBP13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 FLRT1Q9NZU1 646 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 KIAA1468Q9P260 1216 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 TUBE1Q9UJT0 475 aa13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 ZHX1Q9UKY1 873 aaPredicted RBP13.71□□□□□ -0.21
CACNA1C-IT3-201ENST00000542680 NOP56O00567 594 aaKnown RBP13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 MSCO60682 206 aa13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 EYA4O95677 639 aa13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 ZNF865P0CJ78 1059 aaPredicted RBP13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 CYP4A11Q02928 519 aa13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 ARHGAP1Q07960 439 aa13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 CAMK4Q16566 473 aa13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 ECM1Q16610 540 aa13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 LY6KQ17RY6 165 aa13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 C1orf53Q5VUE5 145 aa13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 FAM160B1Q5W0V3 765 aa13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 POTEGQ6S5H5 508 aa13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 PPTC7Q8NI37 304 aa13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 HERVK_113Q902F9 699 aa13.7□□□□□ -0.22
CACNA1C-IT3-201ENST00000542680 GSDMAQ96QA5 445 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms