RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 KIFAP3Q92845 792 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 IWS1Q96ST2 819 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 PCDHB4Q9Y5E5 795 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 SAR1BQ9Y6B6 198 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 PVALEFA0A1B0GWK0 134 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 LGALS16A8MUM7 142 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 KRT76Q01546 638 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 KCNA1Q09470 495 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 EPC2Q52LR7 807 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 C15orf52Q6ZUT6 534 aaKnown RBP11.05□□□□□ -0.64
TOP3A-208ENST00000542570 CEP112Q8N8E3 955 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 ADPGKQ9BRR6 497 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 THAP9Q9H5L6 903 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 HDAC6Q9UBN7 1215 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 COL1A1P02452 1464 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-208ENST00000542570 TNPO2O14787 897 aaKnown RBP11.05□□□□□ -0.64
TOP3A-208ENST00000542570 ABL1P00519 1130 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 CYP11B2P19099 503 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 TKFCQ3LXA3 575 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 FAM83AQ86UY5 434 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 FAM84AQ96KN4 292 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 FUCA2Q9BTY2 467 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 C19orf81C9J6K1 198 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 CLDN3O15551 220 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 EYA4O95677 639 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 CTSHP09668 335 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 PTPRAP18433 802 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 BMP6P22004 513 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 RDXP35241 583 aaKnown RBP11.04□□□□□ -0.64
TOP3A-208ENST00000542570 IRX5P78411 483 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-208ENST00000542570 LRRC63Q05C16 580 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 KAZNQ674X7 775 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 GUF1Q8N442 669 aaKnown RBP11.04□□□□□ -0.64
TOP3A-208ENST00000542570 GMCL1Q96IK5 515 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 DNAJC12Q9UKB3 198 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 COL14A1Q05707 1796 aaKnown RBP11.04□□□□□ -0.64
TOP3A-208ENST00000542570 M0QZ92 97 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 IFNB1P01574 187 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 KIF11P52732 1056 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 MTERF4Q7Z6M4 381 aaKnown RBP11.04□□□□□ -0.64
TOP3A-208ENST00000542570 CCDC125Q86Z20 511 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 FBXL16Q8N461 479 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 MYRIPQ8NFW9 859 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 LMBR1Q8WVP7 490 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 NT5C1BQ96P26 610 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 GOLPH3Q9H4A6 298 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 ABHD10Q9NUJ1 306 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 FBXO40Q9UH90 709 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 RIPK3Q9Y572 518 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 RPA1P27694 616 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 GTF2F1P35269 517 aaKnown RBP eCLIP11.04□□□□□ -0.64
TOP3A-208ENST00000542570 GUCY2FP51841 1108 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 LACTBP83111 547 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-208ENST00000542570 ZBED6P86452 979 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 GABPAQ06546 454 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 CKAP4Q07065 602 aaKnown RBP11.04□□□□□ -0.64
TOP3A-208ENST00000542570 SEPT7Q16181 437 aaKnown RBP11.04□□□□□ -0.64
TOP3A-208ENST00000542570 SARM1Q6SZW1 724 aa11.04□□□□□ -0.64
TOP3A-208ENST00000542570 RBM46Q8TBY0 533 aaKnown RBP11.04□□□□□ -0.64
TOP3A-208ENST00000542570 GOLGA6L10A0A0M3HER8 536 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 TISP43B9A030 160 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 VWA5AO00534 786 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 MEIS2O14770 477 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 C6orf222P0C671 652 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-208ENST00000542570 AFDNP55196 1824 aaKnown RBP11.03□□□□□ -0.64
TOP3A-208ENST00000542570 PRKCEQ02156 737 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 PPP1R7Q15435 360 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 LY6KQ17RY6 165 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 CATSPER4Q7RTX7 472 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 XXYLT1Q8NBI6 393 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 TRAPPC12Q8WVT3 735 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 CDCA5Q96FF9 252 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 PI4K2AQ9BTU6 479 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 TSPYL1Q9H0U9 437 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 PIK3R2O00459 728 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 PLEKP08567 350 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-208ENST00000542570 LMAN1P49257 510 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 PSMD2Q13200 908 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 SNAPC2Q13487 334 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 C8orf74Q6P047 294 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 CAPN12Q6ZSI9 719 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 GPC2Q8N158 579 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 PDCD2LQ9BRP1 358 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 ATP6V0A4Q9HBG4 840 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 INPP5FQ9Y2H2 1132 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 EMSYQ7Z589 1322 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 ESYT2A0FGR8 921 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 NCK2O43639 380 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 RHOBTB3O94955 611 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 MYL1P05976 194 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 KCTD19Q17RG1 926 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-208ENST00000542570 MAP9Q49MG5 647 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 RINT1Q6NUQ1 792 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 ALKBH5Q6P6C2 394 aaKnown RBP11.03□□□□□ -0.64
TOP3A-208ENST00000542570 FASTKD5Q7L8L6 764 aaKnown RBP11.03□□□□□ -0.64
TOP3A-208ENST00000542570 ERO1AQ96HE7 468 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 DPH5Q9H2P9 285 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 TTLL3Q9Y4R7 772 aa11.03□□□□□ -0.64
TOP3A-208ENST00000542570 ZNF233A6NK53 670 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms