RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 GCNT3O95395 438 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 VIL1P09327 827 aaKnown RBP7.17□□□□□ -1.26
PTPRO-208ENST00000542557 FAM228BP0C875 321 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 RSPH10BP0C881 870 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 TAL1P17542 331 aaPredicted RBP7.17□□□□□ -1.26
PTPRO-208ENST00000542557 PON1P27169 355 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 KIAA1755Q5JYT7 1200 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 B3GNT9Q6UX72 402 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 IRF2BP2Q7Z5L9 587 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 SPICE1Q8N0Z3 855 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 NEK9Q8TD19 979 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 ACER1Q8TDN7 264 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 SLC35C1Q96A29 364 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 BORCS6Q96GS4 357 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 DRC1Q96MC2 740 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 ODF2LQ9ULJ1 636 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 NENFQ9UMX5 172 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 LOC102724159A0A0B4J2E5 919 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 TCP10L2B9ZVM9 353 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 TGFB1I1O43294 461 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 FAM13AO94988 1023 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 CFBP00751 764 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 KLRC1P26715 233 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 JAM2P57087 298 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 PWP2Q15269 919 aaKnown RBP7.17□□□□□ -1.26
PTPRO-208ENST00000542557 DLGAP5Q15398 846 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 CFAP221Q4G0U5 840 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 CEP55Q53EZ4 464 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 MEI1Q5TIA1 1274 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 GBP6Q6ZN66 633 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 STXBP4Q6ZWJ1 553 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 MTMR14Q8NCE2 650 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 SPAG5Q96R06 1193 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 SELENOOQ9BVL4 669 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 PARVGQ9HBI0 331 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 SIX2Q9NPC8 291 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 RGL1Q9NZL6 768 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 CALCOCO1Q9P1Z2 691 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 VPS18Q9P253 973 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 ZNF219Q9P2Y4 722 aaPredicted RBP7.17□□□□□ -1.26
PTPRO-208ENST00000542557 FEM1BQ9UK73 627 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 BUB1O43683 1085 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 PPP1R12BO60237 982 aaPredicted RBP7.17□□□□□ -1.26
PTPRO-208ENST00000542557 GAS7O60861 476 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 PALMO75781 387 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 GFPT2O94808 682 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 SLC9A1P19634 815 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 PSMC2P35998 433 aaKnown RBP7.17□□□□□ -1.26
PTPRO-208ENST00000542557 TNNT3P45378 269 aaPredicted RBP7.17□□□□□ -1.26
PTPRO-208ENST00000542557 APBA1Q02410 837 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 IFI16Q16666 785 aaKnown RBP7.17□□□□□ -1.26
PTPRO-208ENST00000542557 KIAA0753Q2KHM9 967 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 MUM1L1Q5H9M0 696 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 FAM83AQ86UY5 434 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 RTKN2Q8IZC4 609 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 ANKRD13CQ8N6S4 541 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 CCDC102AQ96A19 550 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 DYDC2Q96IM9 177 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 NACC1Q96RE7 527 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 FIZ1Q96SL8 496 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 VPS33BQ9H267 617 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 STIM2Q9P246 746 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 FAN1Q9Y2M0 1017 aa7.17□□□□□ -1.26
PTPRO-208ENST00000542557 SHTN1A0MZ66 631 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 NCK2O43639 380 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 N4BP1O75113 896 aaKnown RBP7.16□□□□□ -1.26
PTPRO-208ENST00000542557 FLOT1O75955 427 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 MYBL2P10244 700 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 BCRP11274 1271 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 GUCY2CP25092 1073 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 GHRHRQ02643 423 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 MAP3K10Q02779 954 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 PTK2Q05397 1052 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 NNTQ13423 1086 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 CTTNQ14247 550 aaKnown RBP7.16□□□□□ -1.26
PTPRO-208ENST00000542557 MYBPC2Q14324 1141 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 DCAF17Q5H9S7 520 aaPredicted RBP7.16□□□□□ -1.26
PTPRO-208ENST00000542557 EMBQ6PCB8 327 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 ZNF571Q7Z3V5 609 aaPredicted RBP7.16□□□□□ -1.26
PTPRO-208ENST00000542557 FMNL3Q8IVF7 1028 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 GOLGA5Q8TBA6 731 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 INPP4AQ96PE3 977 aaPredicted RBP7.16□□□□□ -1.26
PTPRO-208ENST00000542557 RIT2Q99578 217 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 TEKT3Q9BXF9 490 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 ADAMTS1Q9UHI8 967 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 INTUQ9ULD6 942 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 SMCHD1A6NHR9 2005 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 COL4A5P29400 1685 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 RPTORQ8N122 1335 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 A0A0A6YYK5 440 aaPredicted RBP7.16□□□□□ -1.26
PTPRO-208ENST00000542557 CLRN2A0PK11 232 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 ERICH4A6NGS2 130 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 SYF2O95926 243 aaKnown RBP7.16□□□□□ -1.26
PTPRO-208ENST00000542557 CHRM1P11229 460 aaPredicted RBP7.16□□□□□ -1.26
PTPRO-208ENST00000542557 ACTN1P12814 892 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 FERP16591 822 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 CASP4P49662 377 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 HSD17B4P51659 736 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 EPHB4P54760 987 aa7.16□□□□□ -1.26
PTPRO-208ENST00000542557 NAP1L1P55209 391 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms