RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 CLDND1Q9NY35 253 aa6.07□□□□□ -1.44
MDM2-228ENST00000542502 HSPBP1Q9NZL4 362 aa6.07□□□□□ -1.44
MDM2-228ENST00000542502 MYOTQ9UBF9 498 aa6.07□□□□□ -1.44
MDM2-228ENST00000542502 WASF3Q9UPY6 502 aa6.07□□□□□ -1.44
MDM2-228ENST00000542502 LRRC7Q96NW7 1537 aa6.07□□□□□ -1.44
MDM2-228ENST00000542502 TMEM94Q12767 1356 aa6.06□□□□□ -1.44
MDM2-228ENST00000542502 SBNO2Q9Y2G9 1366 aa6.06□□□□□ -1.44
MDM2-228ENST00000542502 SMAD7O15105 426 aaKnown RBP6.06□□□□□ -1.44
MDM2-228ENST00000542502 SUSD5O60279 629 aa6.06□□□□□ -1.44
MDM2-228ENST00000542502 ATF4P18848 351 aaPredicted RBP6.06□□□□□ -1.44
MDM2-228ENST00000542502 TNNI3KQ59H18 835 aa6.06□□□□□ -1.44
MDM2-228ENST00000542502 TMEM145Q8NBT3 493 aa6.06□□□□□ -1.44
MDM2-228ENST00000542502 C1orf159Q96HA4 380 aa6.06□□□□□ -1.44
MDM2-228ENST00000542502 PUS7Q96PZ0 661 aaKnown RBP6.06□□□□□ -1.44
MDM2-228ENST00000542502 SMOC1Q9H4F8 434 aa6.06□□□□□ -1.44
MDM2-228ENST00000542502 BARX1Q9HBU1 254 aaPredicted RBP6.06□□□□□ -1.44
MDM2-228ENST00000542502 JADE2Q9NQC1 790 aa6.06□□□□□ -1.44
MDM2-228ENST00000542502 ACTR10Q9NZ32 417 aa6.06□□□□□ -1.44
MDM2-228ENST00000542502 STK26Q9P289 416 aa6.06□□□□□ -1.44
MDM2-228ENST00000542502 ADGRL3Q9HAR2 1447 aa6.06□□□□□ -1.44
MDM2-228ENST00000542502 CENPJQ9HC77 1338 aaPredicted RBP6.05□□□□□ -1.44
MDM2-228ENST00000542502 PATE3B3GLJ2 98 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 CYR61O00622 381 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 B4GALT4O60513 344 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 MAFKO60675 156 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 ACVRL1P37023 503 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 HMGA2P52926 109 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 NFATC3Q12968 1075 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 LARP1BQ659C4 914 aaKnown RBP6.05□□□□□ -1.44
MDM2-228ENST00000542502 SLFN13Q68D06 897 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 TRMT10BQ6PF06 316 aaKnown RBP6.05□□□□□ -1.44
MDM2-228ENST00000542502 PRAM1Q96QH2 718 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 CDIP1Q9H305 208 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 DEF6Q9H4E7 631 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 NPFFR2Q9Y5X5 522 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 PTPRUQ92729 1446 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 STRCP1A6NGW2 1772 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 CDC42BPGQ6DT37 1551 aa6.05□□□□□ -1.44
MDM2-228ENST00000542502 EVC2Q86UK5 1308 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 B2RBV5 119 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 FZD7O75084 574 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 CAPNS1P04632 268 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 SLC35F1Q5T1Q4 408 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 CYP4F22Q6NT55 531 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 ZNF585AQ6P3V2 769 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 TMC5Q6UXY8 1006 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 WWC2-AS2Q96NR7 200 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 ZNF747Q9BV97 191 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 CCSER2Q9H7U1 834 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 ASH2LQ9UBL3 628 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 ZDHHC9Q9Y397 364 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 MRVI1Q9Y6F6 885 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 ANKARQ7Z5J8 1434 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 ADGRB2O60241 1585 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 ARHGEF28Q8N1W1 1705 aaKnown RBP6.04□□□□□ -1.44
MDM2-228ENST00000542502 ASXL1Q8IXJ9 1541 aa6.04□□□□□ -1.44
MDM2-228ENST00000542502 XIRP1Q702N8 1843 aaKnown RBP6.04□□□□□ -1.44
MDM2-228ENST00000542502 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.03□□□□□ -1.44
MDM2-228ENST00000542502 KRIT1O00522 736 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 DDAH1O94760 285 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 SLPIP03973 132 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 COL6A1P12109 1028 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 SELENOPP49908 381 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 R3HDM1Q15032 1099 aaKnown RBP6.03□□□□□ -1.44
MDM2-228ENST00000542502 NBPF8Q3BBV2 869 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 TRIM48Q8IWZ4 208 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 PALM2Q8IXS6 379 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 TTLL11Q8NHH1 800 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 FBXO41Q8TF61 875 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 PTPN18Q99952 460 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 MEGF9Q9H1U4 602 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 VPS11Q9H270 941 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 SEMA4AQ9H3S1 761 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 RBPJLQ9UBG7 517 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 ADAM29Q9UKF5 820 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 TCAF1Q9Y4C2 921 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 NINLQ9Y2I6 1382 aa6.03□□□□□ -1.44
MDM2-228ENST00000542502 TMF1P82094 1093 aa6.02□□□□□ -1.45
MDM2-228ENST00000542502 FXNQ16595 210 aa6.02□□□□□ -1.45
MDM2-228ENST00000542502 MRM1Q6IN84 353 aaKnown RBP6.02□□□□□ -1.45
MDM2-228ENST00000542502 USP51Q70EK9 711 aa6.02□□□□□ -1.45
MDM2-228ENST00000542502 PROSER1Q86XN7 944 aa6.02□□□□□ -1.45
MDM2-228ENST00000542502 ZFPM1Q8IX07 1006 aa6.02□□□□□ -1.45
MDM2-228ENST00000542502 MRIQ9BWK5 157 aa6.02□□□□□ -1.45
MDM2-228ENST00000542502 SLC6A20Q9NP91 592 aa6.02□□□□□ -1.45
MDM2-228ENST00000542502 BRD4O60885 1362 aaPredicted RBP6.02□□□□□ -1.45
MDM2-228ENST00000542502 USP47Q96K76 1375 aa6.02□□□□□ -1.45
MDM2-228ENST00000542502 ITSN1Q15811 1721 aa6.02□□□□□ -1.45
MDM2-228ENST00000542502 QRICH2Q9H0J4 1663 aa6.01□□□□□ -1.45
MDM2-228ENST00000542502 ZNF623O75123 536 aa6.01□□□□□ -1.45
MDM2-228ENST00000542502 KLHL18O94889 574 aa6.01□□□□□ -1.45
MDM2-228ENST00000542502 AMHP03971 560 aa6.01□□□□□ -1.45
MDM2-228ENST00000542502 CHGBP05060 677 aa6.01□□□□□ -1.45
MDM2-228ENST00000542502 SSBP05455 408 aaKnown RBP eCLIP6.01□□□□□ -1.45
MDM2-228ENST00000542502 MAP4K2Q12851 820 aa6.01□□□□□ -1.45
MDM2-228ENST00000542502 VASNQ6EMK4 673 aa6.01□□□□□ -1.45
MDM2-228ENST00000542502 DTX3Q8N9I9 347 aa6.01□□□□□ -1.45
MDM2-228ENST00000542502 NUDT10Q8NFP7 164 aa6.01□□□□□ -1.45
MDM2-228ENST00000542502 MICAL1Q8TDZ2 1067 aa6.01□□□□□ -1.45
MDM2-228ENST00000542502 KCTD13Q8WZ19 329 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms