RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 CCDC175P0C221 793 aa19.01■□□□□ 0.63
TMEM50B-210ENST00000542230 GAP43P17677 238 aa19.01■□□□□ 0.63
TMEM50B-210ENST00000542230 Q3C1V9 767 aa19.01■□□□□ 0.63
TMEM50B-210ENST00000542230 ANO5Q75V66 913 aa19.01■□□□□ 0.63
TMEM50B-210ENST00000542230 KCTD17Q8N5Z5 321 aa19.01■□□□□ 0.63
TMEM50B-210ENST00000542230 LRRN4CLQ8ND94 238 aa19.01■□□□□ 0.63
TMEM50B-210ENST00000542230 SPATC1LQ9H0A9 340 aa19.01■□□□□ 0.63
TMEM50B-210ENST00000542230 MYPNQ86TC9 1320 aa19.01■□□□□ 0.63
TMEM50B-210ENST00000542230 WDR64B1ANS9 1081 aa19■□□□□ 0.63
TMEM50B-210ENST00000542230 PDXKO00764 312 aa19■□□□□ 0.63
TMEM50B-210ENST00000542230 GUCY2CP25092 1073 aa19■□□□□ 0.63
TMEM50B-210ENST00000542230 RBM10P98175 930 aaKnown RBP19■□□□□ 0.63
TMEM50B-210ENST00000542230 ILDR2Q71H61 639 aa19■□□□□ 0.63
TMEM50B-210ENST00000542230 GPRASP2Q96D09 838 aa19■□□□□ 0.63
TMEM50B-210ENST00000542230 ZNF408Q9H9D4 720 aa19■□□□□ 0.63
TMEM50B-210ENST00000542230 TRIM10Q9UDY6 481 aa19■□□□□ 0.63
TMEM50B-210ENST00000542230 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19■□□□□ 0.63
TMEM50B-210ENST00000542230 KIF20AO95235 890 aa19■□□□□ 0.63
TMEM50B-210ENST00000542230 HOXA7P31268 230 aaPredicted RBP19■□□□□ 0.63
TMEM50B-210ENST00000542230 GNG11P61952 73 aa19■□□□□ 0.63
TMEM50B-210ENST00000542230 HERVK_113P62684 666 aa19■□□□□ 0.63
TMEM50B-210ENST00000542230 IRX3P78415 501 aaPredicted RBP19■□□□□ 0.63
TMEM50B-210ENST00000542230 MAP1SQ66K74 1059 aaPredicted RBP19■□□□□ 0.63
TMEM50B-210ENST00000542230 NEK9Q8TD19 979 aa19■□□□□ 0.63
TMEM50B-210ENST00000542230 MOV10L1Q9BXT6 1211 aaKnown RBP19■□□□□ 0.63
TMEM50B-210ENST00000542230 TYW1Q9NV66 732 aaKnown RBP19■□□□□ 0.63
TMEM50B-210ENST00000542230 GABBR1Q9UBS5 961 aa19■□□□□ 0.63
TMEM50B-210ENST00000542230 PCDHB13Q9Y5F0 798 aa19■□□□□ 0.63
TMEM50B-210ENST00000542230 NOL4O94818 638 aa18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 ZBED6P86452 979 aa18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 SEPT14Q6ZU15 432 aa18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 EPN1Q9Y6I3 576 aaPredicted RBP18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 SOWAHBA6NEL2 793 aa18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 PGK2P07205 417 aa18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 GTF2F1P35269 517 aaKnown RBP eCLIP18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 MARSP56192 900 aaKnown RBP18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 PSMC5P62195 406 aa18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 KRT76Q01546 638 aa18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 KCNH2Q12809 1159 aa18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 SWSAP1Q6NVH7 229 aa18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 EEPD1Q7L9B9 569 aa18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 NLRC4Q9NPP4 1024 aa18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 TCEAL9Q9UHQ7 104 aa18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 ODF2LQ9ULJ1 636 aa18.99■□□□□ 0.63
TMEM50B-210ENST00000542230 CCP110O43303 1012 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 NDUFA10O95299 355 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 NF2P35240 595 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 MKRN3Q13064 507 aaKnown RBP18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 MEA1Q16626 185 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 XKR9Q5GH70 373 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 XRRA1Q6P2D8 792 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 PPP4R3CPQ6ZMV5 832 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 RIOX2Q8IUF8 465 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 CCDC60Q8IWA6 550 aaPredicted RBP18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 ZC3H15Q8WU90 426 aaKnown RBP18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 NUP58Q9BVL2 599 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 RBPJLQ9UBG7 517 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 DBR1Q9UK59 544 aaKnown RBP18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 PCDHA10Q9Y5I2 948 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 V9GYY5 206 aaPredicted RBP18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 SPATA31C2B4DYI2 1134 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 LYPLA2O95372 231 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 ACTN1P12814 892 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 ARHGAP25P42331 645 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 JAK3P52333 1124 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 RRAGAQ7L523 313 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 CYFIP1Q7L576 1253 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 C4orf19Q8IY42 314 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 PROCA1Q8NCQ7 364 aaPredicted RBP18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 ZSWIM2Q8NEG5 633 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 CHST13Q8NET6 341 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 BAP1Q92560 729 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 KIFC3Q9BVG8 833 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 JPH1Q9HDC5 661 aaPredicted RBP18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 KCNH4Q9UQ05 1017 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 CLEC11AQ9Y240 323 aa18.98■□□□□ 0.63
TMEM50B-210ENST00000542230 LRRC53A6NM62 1247 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 CALUO43852 315 aaPredicted RBP18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 STBD1O95210 358 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 CYP2J2P51589 502 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 CYP27A1Q02318 531 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 DCAF17Q5H9S7 520 aaPredicted RBP18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 RETREG2Q8NC44 543 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 LSM14BQ9BX40 385 aaKnown RBP18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 STRA6Q9BX79 667 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 KCND2Q9NZV8 630 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 ARMCX3Q9UH62 379 aaPredicted RBP18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 ZNF215Q9UL58 517 aaPredicted RBP18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 WDR81Q562E7 1941 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 K7ENM7 598 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 EIF3DO15371 548 aaKnown RBP eCLIP18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 PPP1R37O75864 691 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 GNA14O95837 355 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 ALDH5A1P51649 535 aaPredicted RBP18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 ACTR2P61160 394 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 FIGNQ5HY92 759 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 GPAT2Q6NUI2 795 aa18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 ZNF746Q6NUN9 644 aaPredicted RBP18.97■□□□□ 0.63
TMEM50B-210ENST00000542230 NHEJ1Q9H9Q4 299 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms