RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 DMRTA1Q5VZB9 504 aa8.91□□□□□ -0.98
NPIPB4-215ENST00000542133 TMEM184AQ6ZMB5 413 aa8.91□□□□□ -0.98
NPIPB4-215ENST00000542133 CRIPAKQ8N1N5 446 aa8.91□□□□□ -0.98
NPIPB4-215ENST00000542133 DTWD2Q8NBA8 298 aa8.91□□□□□ -0.98
NPIPB4-215ENST00000542133 FLCNQ8NFG4 579 aa8.91□□□□□ -0.98
NPIPB4-215ENST00000542133 TBC1D5Q92609 795 aa8.91□□□□□ -0.98
NPIPB4-215ENST00000542133 PMM1Q92871 262 aa8.91□□□□□ -0.98
NPIPB4-215ENST00000542133 SPATA33Q96N06 139 aa8.91□□□□□ -0.98
NPIPB4-215ENST00000542133 RMDN3Q96TC7 470 aa8.91□□□□□ -0.98
NPIPB4-215ENST00000542133 APOL5Q9BWW9 433 aa8.91□□□□□ -0.98
NPIPB4-215ENST00000542133 RNPEPQ9H4A4 650 aa8.91□□□□□ -0.98
NPIPB4-215ENST00000542133 EHMT1Q9H9B1 1298 aa8.91□□□□□ -0.98
NPIPB4-215ENST00000542133 GPR179Q6PRD1 2367 aa8.91□□□□□ -0.98
NPIPB4-215ENST00000542133 MYO10Q9HD67 2058 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 CCDC171Q6TFL3 1326 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 H3BRB1 525 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 PI15O43692 258 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 DHX16O60231 1041 aaKnown RBP8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 ZNF500O60304 480 aaPredicted RBP8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 GGPS1O95749 300 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 CHRNA1P02708 482 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 LGALS2P05162 132 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 ASGR2P07307 311 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 PDHBP11177 359 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 NPR3P17342 541 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 EIF2AK2P19525 551 aaKnown RBP8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 SCP2P22307 547 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 UBA1P22314 1058 aaKnown RBP8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 TECP42680 631 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 SSR1P43307 286 aaKnown RBP8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 UBE3AQ05086 875 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 MGAT3Q09327 533 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 MTA1Q13330 715 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 LPIN1Q14693 890 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 RSPO4Q2I0M5 234 aaPredicted RBP8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 PAN2Q504Q3 1202 aaKnown RBP8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 CELF3Q5SZQ8 465 aaKnown RBP8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 ZNF454Q8N9F8 522 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 KBTBD3Q8NAB2 608 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 CYP2W1Q8TAV3 490 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 OXER1Q8TDS5 423 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 KCNK17Q96T54 332 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 HINFPQ9BQA5 517 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 LARP6Q9BRS8 491 aaKnown RBP8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 NAPBQ9H115 298 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 POMKQ9H5K3 350 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 TUT1Q9H6E5 874 aaKnown RBP8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 SETD4Q9NVD3 440 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 R4GN57 208 aa8.9□□□□□ -0.98
NPIPB4-215ENST00000542133 DENND4AQ7Z401 1863 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 ANKRD11Q6UB99 2663 aaPredicted RBP8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 FANCMQ8IYD8 2048 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 FSCN2O14926 492 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 RNF113AO15541 343 aaKnown RBP8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 PPFIA3O75145 1194 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 NR3C2P08235 984 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 TOP1P11387 765 aaKnown RBP8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 GATMP50440 423 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 ERVFC1P60507 584 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 ADAM17P78536 824 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 ZNF543Q08ER8 600 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 COL9A2Q14055 689 aaPredicted RBP8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 ARHGEF16Q5VV41 709 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 NPAS4Q8IUM7 802 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 DCLK2Q8N568 766 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 RASGRP4Q8TDF6 673 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 LMBR1Q8WVP7 490 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 RUBCNQ92622 972 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 DDX27Q96GQ7 796 aaKnown RBP8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 TMEM47Q9BQJ4 181 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 RTP3Q9BQQ7 232 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 NACAP1Q9BZK3 213 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 PXMP2Q9NR77 195 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 USTQ9Y2C2 406 aa8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 SUPT16HQ9Y5B9 1047 aaKnown RBP8.89□□□□□ -0.99
NPIPB4-215ENST00000542133 ABCB11O95342 1321 aa8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 STK10O94804 968 aaKnown RBP8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 HSP90AA1P07900 732 aaKnown RBP8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 SNHG28P0DPA3 235 aa8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 GNAT1P11488 350 aa8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 HOXB8P17481 243 aaPredicted RBP8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 SP2Q02086 613 aa8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 CTDSPL2Q05D32 466 aa8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 MCM6Q14566 821 aa8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 FBXO47Q5MNV8 452 aa8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 TAF3Q5VWG9 929 aa8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 LLGL2Q6P1M3 1020 aa8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 TRIM50Q86XT4 487 aa8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 ZDHHC14Q8IZN3 488 aa8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 TDRD5Q8NAT2 981 aaKnown RBP8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 NECTIN4Q96NY8 510 aa8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 FAM117AQ9C073 453 aa8.88□□□□□ -0.99
NPIPB4-215ENST00000542133 TK2O00142 265 aa8.87□□□□□ -0.99
NPIPB4-215ENST00000542133 FOXP2O15409 715 aa8.87□□□□□ -0.99
NPIPB4-215ENST00000542133 RANBP6O60518 1105 aaKnown RBP8.87□□□□□ -0.99
NPIPB4-215ENST00000542133 FGF18O76093 207 aa8.87□□□□□ -0.99
NPIPB4-215ENST00000542133 ZFYP08048 801 aaPredicted RBP8.87□□□□□ -0.99
NPIPB4-215ENST00000542133 BDNFP23560 247 aa8.87□□□□□ -0.99
NPIPB4-215ENST00000542133 IGBP1P78318 339 aa8.87□□□□□ -0.99
NPIPB4-215ENST00000542133 ARHGAP4P98171 946 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms