RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 GLRX3O76003 335 aaKnown RBP5.37□□□□□ -1.55
LEMD3-204ENST00000542032 ECE1P42892 770 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 ICAM4Q14773 271 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 EIF4HQ15056 248 aaKnown RBP5.37□□□□□ -1.55
LEMD3-204ENST00000542032 ARHGAP44Q17R89 818 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 TMEM200BQ69YZ2 307 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 CC2D1AQ6P1N0 951 aaPredicted RBP5.37□□□□□ -1.55
LEMD3-204ENST00000542032 GPR155Q7Z3F1 870 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 C2orf69Q8N8R5 385 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 FOXRED1Q96CU9 486 aaPredicted RBP5.37□□□□□ -1.55
LEMD3-204ENST00000542032 LOXL4Q96JB6 756 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 RNPC3Q96LT9 517 aaKnown RBP5.37□□□□□ -1.55
LEMD3-204ENST00000542032 C8orf49Q96NF6 230 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 GBP4Q96PP9 640 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 BOCQ9BWV1 1114 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 UCKL1Q9NWZ5 548 aa5.37□□□□□ -1.55
LEMD3-204ENST00000542032 TRAF5O00463 557 aa5.36□□□□□ -1.55
LEMD3-204ENST00000542032 DVL2O14641 736 aa5.36□□□□□ -1.55
LEMD3-204ENST00000542032 PPP1R12AO14974 1030 aaPredicted RBP5.36□□□□□ -1.55
LEMD3-204ENST00000542032 ZNF20P17024 532 aa5.36□□□□□ -1.55
LEMD3-204ENST00000542032 IRF9Q00978 393 aa5.36□□□□□ -1.55
LEMD3-204ENST00000542032 TRIM68Q6AZZ1 485 aa5.36□□□□□ -1.55
LEMD3-204ENST00000542032 LRSAM1Q6UWE0 723 aa5.36□□□□□ -1.55
LEMD3-204ENST00000542032 DDX53Q86TM3 631 aaKnown RBP5.36□□□□□ -1.55
LEMD3-204ENST00000542032 RTN4RL1Q86UN2 441 aaPredicted RBP5.36□□□□□ -1.55
LEMD3-204ENST00000542032 CIR1Q86X95 450 aaPredicted RBP5.36□□□□□ -1.55
LEMD3-204ENST00000542032 ZFPM1Q8IX07 1006 aa5.36□□□□□ -1.55
LEMD3-204ENST00000542032 SYNPOQ8N3V7 929 aa5.36□□□□□ -1.55
LEMD3-204ENST00000542032 CHST14Q8NCH0 376 aa5.36□□□□□ -1.55
LEMD3-204ENST00000542032 WWC2-AS2Q96NR7 200 aa5.36□□□□□ -1.55
LEMD3-204ENST00000542032 ORAI3Q9BRQ5 295 aa5.36□□□□□ -1.55
LEMD3-204ENST00000542032 OR10A5Q9H207 317 aa5.36□□□□□ -1.55
LEMD3-204ENST00000542032 SHROOM4Q9ULL8 1493 aa5.35□□□□□ -1.55
LEMD3-204ENST00000542032 M0R2C6 588 aa5.35□□□□□ -1.55
LEMD3-204ENST00000542032 SDSP20132 328 aa5.35□□□□□ -1.55
LEMD3-204ENST00000542032 FNTBP49356 437 aa5.35□□□□□ -1.55
LEMD3-204ENST00000542032 CD83Q01151 205 aa5.35□□□□□ -1.55
LEMD3-204ENST00000542032 PABPC4Q13310 644 aaKnown RBP eCLIP5.35□□□□□ -1.55
LEMD3-204ENST00000542032 NFYCQ13952 458 aa5.35□□□□□ -1.55
LEMD3-204ENST00000542032 ZNF460Q14592 562 aa5.35□□□□□ -1.55
LEMD3-204ENST00000542032 CDSNQ15517 529 aa5.35□□□□□ -1.55
LEMD3-204ENST00000542032 WDR72Q3MJ13 1102 aa5.35□□□□□ -1.55
LEMD3-204ENST00000542032 IFNL2Q8IZJ0 200 aa5.35□□□□□ -1.55
LEMD3-204ENST00000542032 DVL3Q92997 716 aaPredicted RBP5.35□□□□□ -1.55
LEMD3-204ENST00000542032 SCYL1Q96KG9 808 aa5.35□□□□□ -1.55
LEMD3-204ENST00000542032 INTS7Q9NVH2 962 aaKnown RBP5.35□□□□□ -1.55
LEMD3-204ENST00000542032 SAMD15Q9P1V8 674 aa5.35□□□□□ -1.55
LEMD3-204ENST00000542032 ST6GALNAC2Q9UJ37 374 aa5.35□□□□□ -1.55
LEMD3-204ENST00000542032 TNPO3Q9Y5L0 923 aaKnown RBP5.35□□□□□ -1.55
LEMD3-204ENST00000542032 PRAMEF22A3QJZ6 481 aa5.34□□□□□ -1.55
LEMD3-204ENST00000542032 FAM83GA6ND36 823 aa5.34□□□□□ -1.55
LEMD3-204ENST00000542032 HIP1RO75146 1068 aa5.34□□□□□ -1.55
LEMD3-204ENST00000542032 ASMTLO95671 621 aa5.34□□□□□ -1.55
LEMD3-204ENST00000542032 GDF5P43026 501 aa5.34□□□□□ -1.55
LEMD3-204ENST00000542032 ALDH6A1Q02252 535 aaKnown RBP5.34□□□□□ -1.55
LEMD3-204ENST00000542032 R3HDM1Q15032 1099 aaKnown RBP5.34□□□□□ -1.55
LEMD3-204ENST00000542032 RNF151Q2KHN1 245 aa5.34□□□□□ -1.55
LEMD3-204ENST00000542032 CREB3L3Q68CJ9 461 aa5.34□□□□□ -1.55
LEMD3-204ENST00000542032 LARP4Q71RC2 724 aaKnown RBP eCLIP5.34□□□□□ -1.55
LEMD3-204ENST00000542032 BCL6BQ8N143 479 aaPredicted RBP5.34□□□□□ -1.55
LEMD3-204ENST00000542032 NEIL1Q96FI4 390 aaPredicted RBP5.34□□□□□ -1.55
LEMD3-204ENST00000542032 B4GALT6Q9UBX8 382 aa5.34□□□□□ -1.55
LEMD3-204ENST00000542032 A0A0G2JNJ9 132 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 CBX4O00257 560 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 MATN2O00339 956 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 OPA1O60313 960 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 C6P13671 934 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 ADCY8P40145 1251 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 HNRNPA0Q13151 305 aaKnown RBP5.33□□□□□ -1.56
LEMD3-204ENST00000542032 DUSP8Q13202 625 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 MOGSQ13724 837 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 TMEM132BQ14DG7 1078 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 TBR1Q16650 682 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 ZMAT1Q5H9K5 638 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.33□□□□□ -1.56
LEMD3-204ENST00000542032 TCTN3Q6NUS6 607 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 HIPK4Q8NE63 616 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 Q8TCH9 128 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 CFHR4Q92496 578 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 LMF1Q96S06 567 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 FOXB1Q99853 325 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 JADE2Q9NQC1 790 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 Q9UFV3 132 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 TSC22D4Q9Y3Q8 395 aa5.33□□□□□ -1.56
LEMD3-204ENST00000542032 FOXS1O43638 330 aa5.32□□□□□ -1.56
LEMD3-204ENST00000542032 HMGCRP04035 888 aa5.32□□□□□ -1.56
LEMD3-204ENST00000542032 POU3F2P20265 443 aaPredicted RBP5.32□□□□□ -1.56
LEMD3-204ENST00000542032 KIF11P52732 1056 aa5.32□□□□□ -1.56
LEMD3-204ENST00000542032 CDCA2Q69YH5 1023 aaPredicted RBP5.32□□□□□ -1.56
LEMD3-204ENST00000542032 GRAMD4Q6IC98 578 aa5.32□□□□□ -1.56
LEMD3-204ENST00000542032 CHST13Q8NET6 341 aa5.32□□□□□ -1.56
LEMD3-204ENST00000542032 CALML6Q8TD86 181 aa5.32□□□□□ -1.56
LEMD3-204ENST00000542032 C16orf92Q96LL3 132 aa5.32□□□□□ -1.56
LEMD3-204ENST00000542032 KLC2Q9H0B6 622 aa5.32□□□□□ -1.56
LEMD3-204ENST00000542032 MSL2Q9HCI7 577 aa5.32□□□□□ -1.56
LEMD3-204ENST00000542032 ACSS2Q9NR19 701 aa5.32□□□□□ -1.56
LEMD3-204ENST00000542032 MAGEC2Q9UBF1 373 aaPredicted RBP5.32□□□□□ -1.56
LEMD3-204ENST00000542032 PTPDC1A2A3K4 754 aa5.31□□□□□ -1.56
LEMD3-204ENST00000542032 ARHGAP6O43182 974 aa5.31□□□□□ -1.56
LEMD3-204ENST00000542032 ZNF623O75123 536 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms