RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ZBTB33Q86T24 672 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 ACER1Q8TDN7 264 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.47■□□□□ 0.39
VARS2-212ENST00000542001 FBF1Q8TES7 1133 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 DDX4Q9NQI0 724 aaKnown RBP17.47■□□□□ 0.39
VARS2-212ENST00000542001 KMT5AQ9NQR1 393 aa17.47■□□□□ 0.39
VARS2-212ENST00000542001 MON2Q7Z3U7 1717 aa17.46■□□□□ 0.39
VARS2-212ENST00000542001 IPO5O00410 1097 aaKnown RBP17.46■□□□□ 0.39
VARS2-212ENST00000542001 NSRP1Q9H0G5 558 aaKnown RBP17.46■□□□□ 0.39
VARS2-212ENST00000542001 ARHGAP20Q9P2F6 1191 aa17.46■□□□□ 0.39
VARS2-212ENST00000542001 CTNND1O60716 968 aaKnown RBP17.46■□□□□ 0.39
VARS2-212ENST00000542001 LXNQ9BS40 222 aa17.46■□□□□ 0.39
VARS2-212ENST00000542001 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.46■□□□□ 0.39
VARS2-212ENST00000542001 ZNF148Q9UQR1 794 aa17.46■□□□□ 0.39
VARS2-212ENST00000542001 MYO1FO00160 1098 aa17.46■□□□□ 0.38
VARS2-212ENST00000542001 ZBTB39O15060 712 aa17.46■□□□□ 0.38
VARS2-212ENST00000542001 MED24O75448 989 aa17.46■□□□□ 0.38
VARS2-212ENST00000542001 DESP17661 470 aa17.46■□□□□ 0.38
VARS2-212ENST00000542001 SCARA5Q6ZMJ2 495 aa17.46■□□□□ 0.38
VARS2-212ENST00000542001 FAM118BQ9BPY3 351 aa17.46■□□□□ 0.38
VARS2-212ENST00000542001 PDS5AQ29RF7 1337 aaKnown RBP17.45■□□□□ 0.38
VARS2-212ENST00000542001 LMNB1P20700 586 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 PTK2Q05397 1052 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 PODNQ7Z5L7 613 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 NT5C1BQ96P26 610 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 CELF4Q9BZC1 486 aaKnown RBP17.45■□□□□ 0.38
VARS2-212ENST00000542001 DDTLA6NHG4 134 aaPredicted RBP17.45■□□□□ 0.38
VARS2-212ENST00000542001 ATP2A1O14983 1001 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 ATMINO43313 823 aaPredicted RBP17.45■□□□□ 0.38
VARS2-212ENST00000542001 CYP2C19P33261 490 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 SPP2Q13103 211 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 TBX2Q13207 712 aaPredicted RBP17.45■□□□□ 0.38
VARS2-212ENST00000542001 CCDC38Q502W7 563 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 C2CD6Q53TS8 623 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 BEND6Q5SZJ8 279 aaPredicted RBP17.45■□□□□ 0.38
VARS2-212ENST00000542001 CATSPER3Q86XQ3 398 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 DUSP9Q99956 384 aaKnown RBP17.45■□□□□ 0.38
VARS2-212ENST00000542001 NXF1Q9UBU9 619 aaKnown RBP17.45■□□□□ 0.38
VARS2-212ENST00000542001 EPHB6O15197 1021 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 CLTAP09496 248 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 UCHL3P15374 230 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 LIN9Q5TKA1 542 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 MTRQ99707 1265 aa17.45■□□□□ 0.38
VARS2-212ENST00000542001 BZW2Q9Y6E2 419 aaKnown RBP17.45■□□□□ 0.38
VARS2-212ENST00000542001 NCAPG2Q86XI2 1143 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 RMDN3Q96TC7 470 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 TRIM51Q9BSJ1 452 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 WDR11Q9BZH6 1224 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 ANKZF1Q9H8Y5 726 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 THAP12O43422 761 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 E2F5Q15329 346 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 SCYL2Q6P3W7 929 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 SLC30A5Q8TAD4 765 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 ANO9A1A5B4 782 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 hCG_1984214I3L0E3 225 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 FTLP02792 175 aaPredicted RBP17.44■□□□□ 0.38
VARS2-212ENST00000542001 GYS1P13807 737 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 MAPK4P31152 587 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 NSFP46459 744 aaKnown RBP17.44■□□□□ 0.38
VARS2-212ENST00000542001 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.44■□□□□ 0.38
VARS2-212ENST00000542001 ZNF713Q8N859 430 aaPredicted RBP17.44■□□□□ 0.38
VARS2-212ENST00000542001 FMO2Q99518 471 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 PCDHB4Q9Y5E5 795 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 ITIH6Q6UXX5 1313 aa17.44■□□□□ 0.38
VARS2-212ENST00000542001 GAS8O95995 478 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 MXRA7P84157 204 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 CCDC6Q16204 474 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 CCNI2Q6ZMN8 369 aaPredicted RBP17.43■□□□□ 0.38
VARS2-212ENST00000542001 CACNA2D3Q8IZS8 1091 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 PSMD1Q99460 953 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 PRR12Q9ULL5 1215 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 EMSYQ7Z589 1322 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 NAALADL2Q58DX5 795 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 CCDC91Q7Z6B0 441 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 KIFC3Q9BVG8 833 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.43■□□□□ 0.38
VARS2-212ENST00000542001 SRGAP2CP0DJJ0 459 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 DR1Q01658 176 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 VSIG1Q86XK7 387 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 SP8Q8IXZ3 490 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 GDAP1Q8TB36 358 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 TBC1D31Q96DN5 1066 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 HSD3B7Q9H2F3 369 aa17.43■□□□□ 0.38
VARS2-212ENST00000542001 RCCD1A6NED2 376 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 GAP43P17677 238 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 STX2P32856 288 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 PIK3CAP42336 1068 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 NPEPPSP55786 919 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 PDIA5Q14554 519 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 SGO2Q562F6 1265 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 CTAGE3PQ8IX95 158 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 TMEM39BQ9GZU3 492 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 AZI2Q9H6S1 392 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 TTI1O43156 1089 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 SART1O43290 800 aaKnown RBP17.42■□□□□ 0.38
VARS2-212ENST00000542001 SEC24CP53992 1094 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 TFAMQ00059 246 aaKnown RBP17.42■□□□□ 0.38
VARS2-212ENST00000542001 LDHDQ86WU2 507 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 PROM2Q8N271 834 aa17.42■□□□□ 0.38
VARS2-212ENST00000542001 SUPT20HQ8NEM7 779 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms