RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 HACL1Q9UJ83 578 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 PLAAQ9Y263 795 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 ST14Q9Y5Y6 855 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 LAMB2P55268 1798 aa6.67□□□□□ -1.34
CPSF7-220ENST00000541963 SHISA3A0PJX4 238 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 GRM8O00222 908 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 PLD2O14939 933 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 IPO8O15397 1037 aaKnown RBP6.66□□□□□ -1.34
CPSF7-220ENST00000541963 CSF1RP07333 972 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 SYPP08247 313 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 SRFP11831 508 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 FOSL1P15407 271 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 HSPA6P17066 643 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 BMP8BP34820 402 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 SEPHS1P49903 392 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 GPSM2P81274 684 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 MAP4K2Q12851 820 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 IFIT5Q13325 482 aaKnown RBP6.66□□□□□ -1.34
CPSF7-220ENST00000541963 CCDC57Q2TAC2 916 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 YOD1Q5VVQ6 348 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-220ENST00000541963 FOXB2Q5VYV0 432 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 TMPRSS7Q7RTY8 843 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 KSR1Q8IVT5 923 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 SPACA3Q8IXA5 215 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 TBC1D16Q8TBP0 767 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 ASB11Q8WXH4 323 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 SPOCK3Q9BQ16 436 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 API5Q9BZZ5 524 aaKnown RBP6.66□□□□□ -1.34
CPSF7-220ENST00000541963 ANKRD2Q9GZV1 360 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 GREM2Q9H772 168 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 SPC25Q9HBM1 224 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 BSDC1Q9NW68 430 aaPredicted RBP6.66□□□□□ -1.34
CPSF7-220ENST00000541963 DUSP13Q9UII6 198 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 MINPP1Q9UNW1 487 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 DDX60Q8IY21 1712 aaKnown RBP6.66□□□□□ -1.34
CPSF7-220ENST00000541963 RTL9Q8NET4 1388 aa6.66□□□□□ -1.34
CPSF7-220ENST00000541963 TIAM2Q8IVF5 1701 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 C2orf71A6NGG8 1288 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 TBX1O43435 398 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 DYRK3O43781 588 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 DNAJC6O75061 913 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 UFL1O94874 794 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 ITGB2P05107 769 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 VAV1P15498 845 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 EPHX2P34913 555 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 GRIA2P42262 883 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 CCT4P50991 539 aaKnown RBP6.65□□□□□ -1.34
CPSF7-220ENST00000541963 RSPO4Q2I0M5 234 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-220ENST00000541963 FNDC3BQ53EP0 1204 aaKnown RBP6.65□□□□□ -1.34
CPSF7-220ENST00000541963 NKAPLQ5M9Q1 402 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 CIAPIN1Q6FI81 312 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 CRTC3Q6UUV7 619 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 RNF111Q6ZNA4 994 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 FILIP1Q7Z7B0 1213 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 CREG2Q8IUH2 290 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 ZDHHC13Q8IUH4 622 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 PLD6Q8N2A8 252 aaKnown RBP6.65□□□□□ -1.34
CPSF7-220ENST00000541963 KISS1RQ969F8 398 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-220ENST00000541963 OSBP2Q969R2 916 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 HRASLS5Q96KN8 279 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 EXOC2Q96KP1 924 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 MRPL4Q9BYD3 311 aaKnown RBP6.65□□□□□ -1.34
CPSF7-220ENST00000541963 TAF1DQ9H5J8 278 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-220ENST00000541963 NCOA5Q9HCD5 579 aaKnown RBP6.65□□□□□ -1.34
CPSF7-220ENST00000541963 POLLQ9UGP5 575 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 TCFL5Q9UL49 500 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 NOB1Q9ULX3 412 aaKnown RBP6.65□□□□□ -1.34
CPSF7-220ENST00000541963 BACE2Q9Y5Z0 518 aa6.65□□□□□ -1.34
CPSF7-220ENST00000541963 XDHP47989 1333 aa6.65□□□□□ -1.35
CPSF7-220ENST00000541963 ZNF541Q9H0D2 1346 aa6.65□□□□□ -1.35
CPSF7-220ENST00000541963 SNED1Q8TER0 1413 aa6.65□□□□□ -1.35
CPSF7-220ENST00000541963 WDR90Q96KV7 1748 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 H7C1D1 291 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 DLX3O60479 287 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 EFCAB14O75071 495 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 GSTM1P09488 218 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 KCNJ4P48050 445 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 GFRA1P56159 465 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 GABREP78334 506 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 FOXO4P98177 505 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 CXCL9Q07325 125 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 SCRN1Q12765 414 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 TKFCQ3LXA3 575 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 LMBR1LQ6UX01 489 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 USP50Q70EL3 339 aaPredicted RBP6.64□□□□□ -1.35
CPSF7-220ENST00000541963 LDHDQ86WU2 507 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 ARHGAP45Q92619 1136 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 MISP3Q96FF7 219 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 PLAGL2Q9UPG8 496 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 SCN4AP35499 1836 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 TAF1P21675 1872 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 MYH3P11055 1940 aa6.64□□□□□ -1.35
CPSF7-220ENST00000541963 TRBV23OR9-2A0A075B6M9 112 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 STXBP3O00186 592 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 UTYO14607 1347 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 AURKAO14965 403 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 ECE2O60344 883 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 RFPL3O75679 317 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 RAD17O75943 681 aa6.63□□□□□ -1.35
CPSF7-220ENST00000541963 SCG5P05408 212 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms