RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 FAM107AO95990 144 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 SESTD1Q86VW0 696 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 DGKHQ86XP1 1220 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 DEPDC1BQ8WUY9 529 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 TUBE1Q9UJT0 475 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 CAPN9O14815 690 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 SAT1P21673 171 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 ATP2B4P23634 1241 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 PDXDC1Q6P996 788 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 DPF2Q92785 391 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 DNAJC12Q9UKB3 198 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 MTF1Q14872 753 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 ZYXQ15942 572 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 GUF1Q8N442 669 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 NUB1Q9Y5A7 615 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 SERPINB4P48594 390 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 ICA1Q05084 483 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 JDP2Q8WYK2 163 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 USP15Q9Y4E8 981 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 TRPM1Q7Z4N2 1603 aa16.04■□□□□ 0.16
SMARCA4-207ENST00000541122 CFLARO15519 480 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 STAT2P52630 851 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 STAT4Q14765 748 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 CRYMQ14894 314 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 ATP6V0A1Q93050 837 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 SNF8Q96H20 258 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 FAM161BQ96MY7 647 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 WNT8AQ9H1J5 351 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 TRIM33Q9UPN9 1127 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 TTLL1O95922 423 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 ARHGEF16Q5VV41 709 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 METTL16Q86W50 562 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 MMGT1Q8N4V1 131 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 DACT3Q96B18 629 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 SEC16BQ96JE7 1060 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 DIAPH2O60879 1101 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 RGS9BPQ6ZS82 235 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 KCTD6Q8NC69 237 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 IL17RAQ96F46 866 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 STRBPQ96SI9 672 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 SHROOM2Q13796 1616 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 HSPA4LO95757 839 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 PLA2G4AP47712 749 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 PCYT1AP49585 367 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 PFKFB3Q16875 520 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 CERKLQ49MI3 558 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 XPO6Q96QU8 1125 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 PIGSQ96S52 555 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 BRIP1Q9BX63 1249 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 GPHNQ9NQX3 736 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 SMYD2Q9NRG4 433 aa16.03■□□□□ 0.16
SMARCA4-207ENST00000541122 USP42Q9H9J4 1324 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-207ENST00000541122 NR1I3Q14994 352 aa16.02■□□□□ 0.16
SMARCA4-207ENST00000541122 SYDE1Q6ZW31 735 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-207ENST00000541122 HACE1Q8IYU2 909 aa16.02■□□□□ 0.16
SMARCA4-207ENST00000541122 CFAP36Q96G28 342 aa16.02■□□□□ 0.16
SMARCA4-207ENST00000541122 SSU72P8A0A1W2PR75 194 aa16.02■□□□□ 0.16
SMARCA4-207ENST00000541122 TESPA1A2RU30 521 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-207ENST00000541122 ZRANB2O95218 330 aaKnown RBP eCLIP16.02■□□□□ 0.16
SMARCA4-207ENST00000541122 TC2NQ8N9U0 490 aa16.02■□□□□ 0.16
SMARCA4-207ENST00000541122 BCORL1Q5H9F3 1711 aa16.02■□□□□ 0.16
SMARCA4-207ENST00000541122 KPNA7A9QM74 516 aa16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 RSPH3Q86UC2 560 aa16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 ELOA2Q8IYF1 753 aaPredicted RBP16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 CYFIP2Q96F07 1278 aa16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 ADPGKQ9BRR6 497 aa16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 SLC40A1Q9NP59 571 aa16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 SMG5Q9UPR3 1016 aaKnown RBP16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 THRAP3Q9Y2W1 955 aaKnown RBP16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 POLGP54098 1239 aaPredicted RBP16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 GIPC2Q8TF65 315 aa16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 RFFLQ8WZ73 363 aa16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 ZNF577Q9BSK1 485 aa16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 DNAJC17Q9NVM6 304 aaKnown RBP16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 PITPNM2Q9BZ72 1349 aa16.02■□□□□ 0.15
SMARCA4-207ENST00000541122 S100BP04271 92 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 RARS2Q5T160 578 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 SPOPLQ6IQ16 392 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 TRMT10CQ7L0Y3 403 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 PRPF31Q8WWY3 499 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 NRBP2Q9NSY0 501 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 ZBTB12Q9Y330 459 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 PRKAB2O43741 272 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 ALX1Q15699 326 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 ACAD11Q709F0 780 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 BZW1Q7L1Q6 419 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 SUPT20HQ8NEM7 779 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 RAD54LQ92698 747 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 KLC2Q9H0B6 622 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 PPCSQ9HAB8 311 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 KMT5AQ9NQR1 393 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 IRAK4Q9NWZ3 460 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 FHOD1Q9Y613 1164 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 MAN1A2O60476 641 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 ARL4AP40617 200 aa16.01■□□□□ 0.15
SMARCA4-207ENST00000541122 KCNH2Q12809 1159 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms