RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 NDST4Q9H3R1 872 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 VAV3Q9UKW4 847 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 ZNF215Q9UL58 517 aaPredicted RBP11.22□□□□□ -0.61
LMO3-224ENST00000540848 FAM184BQ9ULE4 1060 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 PHF20L1A8MW92 1017 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 E9PMD0 336 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 COBLO75128 1261 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 EYA4O95677 639 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 CFBP00751 764 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 SSBP05455 408 aaKnown RBP eCLIP11.21□□□□□ -0.61
LMO3-224ENST00000540848 BCRP11274 1271 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 HNRNPH3P31942 346 aaKnown RBP11.21□□□□□ -0.61
LMO3-224ENST00000540848 RBM10P98175 930 aaKnown RBP11.21□□□□□ -0.61
LMO3-224ENST00000540848 RASA3Q14644 834 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 CEP55Q53EZ4 464 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 HERC4Q5GLZ8 1057 aaPredicted RBP11.21□□□□□ -0.61
LMO3-224ENST00000540848 DCAF15Q66K64 600 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 NCAPH2Q6IBW4 605 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 P2RX7Q99572 595 aaKnown RBP11.21□□□□□ -0.61
LMO3-224ENST00000540848 FEZ1Q99689 392 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 SLF1Q9BQI6 1058 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 KLF16Q9BXK1 252 aaPredicted RBP11.21□□□□□ -0.61
LMO3-224ENST00000540848 PCDHA2Q9Y5H9 948 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 COL4A3BPQ9Y5P4 624 aa11.21□□□□□ -0.61
LMO3-224ENST00000540848 EPN1Q9Y6I3 576 aaPredicted RBP11.21□□□□□ -0.61
LMO3-224ENST00000540848 EFCAB8A8MWE9 144 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 PSMD10O75832 226 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 NDUFA10O95299 355 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 SPATA31C1P0DKV0 1188 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 HOXA13P31271 388 aaPredicted RBP11.2□□□□□ -0.62
LMO3-224ENST00000540848 HSD17B4P51659 736 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 ERVK-24P63145 666 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 BMT2Q1RMZ1 405 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 NBPF9Q3BBW0 867 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 KIAA1755Q5JYT7 1200 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 LRCH2Q5VUJ6 765 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 LDHDQ86WU2 507 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 MNS1Q8NEH6 495 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 CDK15Q96Q40 435 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 RIT2Q99578 217 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 EIF2AK1Q9BQI3 630 aaKnown RBP11.2□□□□□ -0.62
LMO3-224ENST00000540848 HAUS4Q9H6D7 363 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 SEL1LQ9UBV2 794 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 UBE4BO95155 1302 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 RBBP6Q7Z6E9 1792 aaKnown RBP11.2□□□□□ -0.62
LMO3-224ENST00000540848 NFKBIEO00221 500 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 MEIS1O00470 390 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 EIF3DO15371 548 aaKnown RBP eCLIP11.2□□□□□ -0.62
LMO3-224ENST00000540848 TBCAO75347 108 aaKnown RBP11.2□□□□□ -0.62
LMO3-224ENST00000540848 URI1O94763 535 aaPredicted RBP11.2□□□□□ -0.62
LMO3-224ENST00000540848 PRELPP51888 382 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 SNAP25P60880 206 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 MTF1Q14872 753 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 CCDC174Q6PII3 467 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 OTOP1Q7RTM1 612 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 FAM174AQ8TBP5 190 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 FBXO41Q8TF61 875 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 PCMTD1Q96MG8 357 aaPredicted RBP11.2□□□□□ -0.62
LMO3-224ENST00000540848 TEPSINQ96N21 525 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 HSD17B14Q9BPX1 270 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 DESI2Q9BSY9 194 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 ZNF341Q9BYN7 854 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 TSGA10Q9BZW7 698 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 MRPL44Q9H9J2 332 aaKnown RBP11.2□□□□□ -0.62
LMO3-224ENST00000540848 GPBP1L1Q9HC44 474 aaPredicted RBP11.2□□□□□ -0.62
LMO3-224ENST00000540848 OLFML3Q9NRN5 406 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 TRAF3IP3Q9Y228 551 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 SIK3Q9Y2K2 1263 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 MRFAP1Q9Y605 127 aa11.2□□□□□ -0.62
LMO3-224ENST00000540848 RPTORQ8N122 1335 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 CTAGE9A4FU28 777 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 EIF3CLB5ME19 914 aaKnown RBP11.19□□□□□ -0.62
LMO3-224ENST00000540848 TRAF5O00463 557 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 PDXKO00764 312 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 TERTO14746 1132 aaKnown RBP11.19□□□□□ -0.62
LMO3-224ENST00000540848 CETN3O15182 167 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 CALUO43852 315 aaPredicted RBP11.19□□□□□ -0.62
LMO3-224ENST00000540848 GAS7O60861 476 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 TIMP2P16035 220 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 RPL13P26373 211 aaKnown RBP11.19□□□□□ -0.62
LMO3-224ENST00000540848 STAT3P40763 770 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 GIT2Q14161 759 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 EPHA7Q15375 998 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 NFIL3Q16649 462 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 CCDC40Q4G0X9 1142 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 ARSHQ5FYA8 562 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 STXBP4Q6ZWJ1 553 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 MIGA2Q7L4E1 593 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 APOBEC3FQ8IUX4 373 aaKnown RBP11.19□□□□□ -0.62
LMO3-224ENST00000540848 SYN2Q92777 582 aaPredicted RBP11.19□□□□□ -0.62
LMO3-224ENST00000540848 HPS3Q969F9 1004 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 NACC1Q96RE7 527 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 EIF3CQ99613 913 aaKnown RBP11.19□□□□□ -0.62
LMO3-224ENST00000540848 TEKT3Q9BXF9 490 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 KCTD10Q9H3F6 313 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 AS3MTQ9HBK9 375 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 CCPG1Q9ULG6 757 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 PLAGL2Q9UPG8 496 aa11.19□□□□□ -0.62
LMO3-224ENST00000540848 DOCK1Q14185 1865 aa11.18□□□□□ -0.62
LMO3-224ENST00000540848 FZD9O00144 591 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms