RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 RCOR1Q9UKL0 485 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 KIAA1024Q9UPX6 916 aa17.33■□□□□ 0.36
DDB1-218ENST00000540784 DNAH12Q6ZR08 3092 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 TMEM150BA6NC51 233 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 NPEPPSP55786 919 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 GRIN1Q05586 938 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 ZRSR1Q15695 479 aaKnown RBP17.32■□□□□ 0.36
DDB1-218ENST00000540784 XKR9Q5GH70 373 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 TAF2Q6P1X5 1199 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 RSPH3Q86UC2 560 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 CABP7Q86V35 215 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 METTL13Q8N6R0 699 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 CAGE1Q8TC20 777 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 KCNG4Q8TDN1 519 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 PIGOQ8TEQ8 1089 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 ZBTB10Q96DT7 871 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 CLIC6Q96NY7 704 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 LBHD1Q9BQE6 289 aaPredicted RBP17.32■□□□□ 0.36
DDB1-218ENST00000540784 SH2D3AQ9BRG2 576 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 NOC4LQ9BVI4 516 aaKnown RBP17.32■□□□□ 0.36
DDB1-218ENST00000540784 PPP1R12CQ9BZL4 782 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 CYP26B1Q9NR63 512 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 CHMP5Q9NZZ3 219 aa17.32■□□□□ 0.36
DDB1-218ENST00000540784 MKI67P46013 3256 aaKnown RBP17.32■□□□□ 0.36
DDB1-218ENST00000540784 SMIM35A0A1B0GVV1 85 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 H0YGN5 161 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 SLC26A4O43511 780 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 CYP2C18P33260 490 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 THPOP40225 353 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 TBC1D8BQ0IIM8 1120 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 ECM1Q16610 540 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 PLA2G4FQ68DD2 849 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 EFCAB12Q6NXP0 572 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 POTEGQ6S5H5 508 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 RUFY4Q6ZNE9 571 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 EXOC8Q8IYI6 725 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 NME8Q8N427 588 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 ZNF579Q8NAF0 562 aaKnown RBP17.31■□□□□ 0.36
DDB1-218ENST00000540784 DNAJB3Q8WWF6 145 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 DHX38Q92620 1227 aaKnown RBP17.31■□□□□ 0.36
DDB1-218ENST00000540784 CDK5RAP3Q96JB5 506 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 CCDC43Q96MW1 224 aaKnown RBP17.31■□□□□ 0.36
DDB1-218ENST00000540784 MMTAG2Q9BU76 263 aaKnown RBP17.31■□□□□ 0.36
DDB1-218ENST00000540784 SUGCTQ9HAC7 445 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 DDX19AQ9NUU7 478 aaKnown RBP17.31■□□□□ 0.36
DDB1-218ENST00000540784 DNM3Q9UQ16 869 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 PPME1Q9Y570 386 aa17.31■□□□□ 0.36
DDB1-218ENST00000540784 PITPNM1O00562 1244 aa17.3■□□□□ 0.36
DDB1-218ENST00000540784 C22orf31O95567 290 aa17.3■□□□□ 0.36
DDB1-218ENST00000540784 RPLP2P05387 115 aaKnown RBP17.3■□□□□ 0.36
DDB1-218ENST00000540784 CKBP12277 381 aa17.3■□□□□ 0.36
DDB1-218ENST00000540784 TMOD1P28289 359 aa17.3■□□□□ 0.36
DDB1-218ENST00000540784 ME1P48163 572 aa17.3■□□□□ 0.36
DDB1-218ENST00000540784 TRIM71Q2Q1W2 868 aaKnown RBP17.3■□□□□ 0.36
DDB1-218ENST00000540784 SPECC1Q5M775 1068 aa17.3■□□□□ 0.36
DDB1-218ENST00000540784 RPAINQ86UA6 219 aa17.3■□□□□ 0.36
DDB1-218ENST00000540784 KCTD17Q8N5Z5 321 aa17.3■□□□□ 0.36
DDB1-218ENST00000540784 WNT8BQ93098 351 aa17.3■□□□□ 0.36
DDB1-218ENST00000540784 CALML4Q96GE6 196 aa17.3■□□□□ 0.36
DDB1-218ENST00000540784 SPATA32Q96LK8 384 aa17.3■□□□□ 0.36
DDB1-218ENST00000540784 JPH2Q9BR39 696 aaPredicted RBP17.3■□□□□ 0.36
DDB1-218ENST00000540784 SCAND2PQ9GZW5 306 aaPredicted RBP17.3■□□□□ 0.36
DDB1-218ENST00000540784 FAM49AQ9H0Q0 323 aaPredicted RBP17.3■□□□□ 0.36
DDB1-218ENST00000540784 DBR1Q9UK59 544 aaKnown RBP17.3■□□□□ 0.36
DDB1-218ENST00000540784 KDM3AQ9Y4C1 1321 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 CUTAO60888 179 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 CAND2O75155 1236 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 MAFO75444 373 aaPredicted RBP17.29■□□□□ 0.36
DDB1-218ENST00000540784 SELPP16109 830 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 ITGB8P26012 769 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 RFC5P40937 340 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 DNM2P50570 870 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 CCL23P55773 120 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 HYIQ5T013 277 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 MFSD5Q6N075 450 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 KIAA0319LQ8IZA0 1049 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 TMEM199Q8N511 208 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 RASSF8Q8NHQ8 419 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 SLC7A3Q8WY07 619 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 BADQ92934 168 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 EPSTI1Q96J88 318 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 CHAMP1Q96JM3 812 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 CEP89Q96ST8 783 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 PLIN2Q99541 437 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 CCSER1Q9C0I3 900 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 NT5C3AQ9H0P0 336 aa17.29■□□□□ 0.36
DDB1-218ENST00000540784 UMODL1Q5DID0 1318 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 MYH9P35579 1960 aaKnown RBP17.28■□□□□ 0.36
DDB1-218ENST00000540784 RSPH10B2B2RC85 870 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 IQCF3P0C7M6 154 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 RSPH10BP0C881 870 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 TXLNAP40222 546 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 RARRES1P49788 294 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 POLGP54098 1239 aaPredicted RBP17.28■□□□□ 0.36
DDB1-218ENST00000540784 RBL2Q08999 1139 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 GRB10Q13322 594 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 ZNF618Q5T7W0 954 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 IER5Q5VY09 327 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 USP49Q70CQ1 688 aa17.28■□□□□ 0.36
DDB1-218ENST00000540784 LEO1Q8WVC0 666 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms