RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 FAAP100Q0VG06 881 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 FAM160B1Q5W0V3 765 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 FAM109BQ6ICB4 259 aaPredicted RBP11.85□□□□□ -0.51
ATL3-204ENST00000540699 SH3RF1Q7Z6J0 888 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 CTAGE1Q96RT6 745 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 LBHD1Q9BQE6 289 aaPredicted RBP11.85□□□□□ -0.51
ATL3-204ENST00000540699 COL25A1Q9BXS0 654 aaPredicted RBP11.85□□□□□ -0.51
ATL3-204ENST00000540699 TSPY26PQ9H489 355 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 AZI2Q9H6S1 392 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 TTC12Q9H892 705 aaPredicted RBP11.85□□□□□ -0.51
ATL3-204ENST00000540699 ZNF302Q9NR11 478 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 HDAC6Q9UBN7 1215 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 USP25Q9UHP3 1055 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 SERTAD1Q9UHV2 236 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 PCDHA12Q9UN75 941 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 ATP11BQ9Y2G3 1177 aa11.85□□□□□ -0.51
ATL3-204ENST00000540699 PP2D1A8MPX8 630 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 B4GALT4O60513 344 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 SMIM10L2AP0DMW4 78 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 SMIM10L2BP0DMW5 78 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 ATP4AP20648 1035 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 TYRO3Q06418 890 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 HIC1Q14526 733 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 PDIA5Q14554 519 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 PLCB4Q15147 1175 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 EPHA7Q15375 998 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 GDF6Q6KF10 455 aaPredicted RBP11.84□□□□□ -0.51
ATL3-204ENST00000540699 SWSAP1Q6NVH7 229 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 MIER3Q7Z3K6 550 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 C7orf31Q8N865 590 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 CNNM3Q8NE01 707 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 GLG1Q92896 1179 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 PYM1Q9BRP8 204 aaKnown RBP11.84□□□□□ -0.51
ATL3-204ENST00000540699 MMTAG2Q9BU76 263 aaKnown RBP11.84□□□□□ -0.51
ATL3-204ENST00000540699 RBSNQ9H1K0 784 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 RNPEPQ9H4A4 650 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 PDLIM7Q9NR12 457 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 KIAA1468Q9P260 1216 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 TUBE1Q9UJT0 475 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 TBX21Q9UL17 535 aa11.84□□□□□ -0.51
ATL3-204ENST00000540699 COL1A2P08123 1366 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 DCDC2CA8MYV0 355 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 BACH1O14867 736 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 KIAA0355O15063 1070 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 CHMP2AO43633 222 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 ZNF862O60290 1169 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 MARCH6O60337 910 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 PQBP1O60828 265 aaKnown RBP11.83□□□□□ -0.52
ATL3-204ENST00000540699 STBD1O95210 358 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 SLFN14P0C7P3 912 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 CCDC192P0DO97 292 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 CDC25AP30304 524 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 TECP42680 631 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 TXKP42681 527 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 KARSQ15046 597 aaKnown RBP11.83□□□□□ -0.52
ATL3-204ENST00000540699 UGCGQ16739 394 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 TMEM266Q2M3C6 531 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 PDXDC2PQ6P474 469 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 PDILTQ8N807 584 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 NEK9Q8TD19 979 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 ATP8B4Q8TF62 1192 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 LRRC15Q8TF66 581 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 DHX58Q96C10 678 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 HSD17B14Q9BPX1 270 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 TRPV6Q9H1D0 765 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 GABBR1Q9UBS5 961 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 PRKAG2Q9UGJ0 569 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 SAMM50Q9Y512 469 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 NRCAMQ92823 1304 aa11.83□□□□□ -0.52
ATL3-204ENST00000540699 SIP14410 1827 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 POTEB3A0JP26 581 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 MBLAC1A4D2B0 266 aaPredicted RBP11.82□□□□□ -0.52
ATL3-204ENST00000540699 POTEMA6NI47 508 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 TLR3O15455 904 aaKnown RBP11.82□□□□□ -0.52
ATL3-204ENST00000540699 HBP1O60381 514 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 P4HBP07237 508 aaKnown RBP11.82□□□□□ -0.52
ATL3-204ENST00000540699 CLTBP09497 229 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 PRR29P0C7W0 189 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 MARK3P27448 753 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 TXLNAP40222 546 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 QARSP47897 775 aaKnown RBP11.82□□□□□ -0.52
ATL3-204ENST00000540699 RBL2Q08999 1139 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 PPFIA1Q13136 1202 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 NAALADL2Q58DX5 795 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 FAM47CQ5HY64 1035 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 MARCH8Q5T0T0 291 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 NT5DC1Q5TFE4 455 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 KANK3Q6NY19 840 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 POTEBQ6S5H4 581 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 CABP7Q86V35 215 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 SERINC5Q86VE9 423 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.82□□□□□ -0.52
ATL3-204ENST00000540699 IQUBQ8NA54 791 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 SPATA20Q8TB22 786 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 PPP1R13LQ8WUF5 828 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 LMBR1Q8WVP7 490 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 BBXQ8WY36 941 aaPredicted RBP11.82□□□□□ -0.52
ATL3-204ENST00000540699 ERCC4Q92889 916 aaPredicted RBP11.82□□□□□ -0.52
ATL3-204ENST00000540699 ATP6V0A1Q93050 837 aa11.82□□□□□ -0.52
ATL3-204ENST00000540699 FAM167AQ96KS9 214 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms