RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 LEMD3Q9Y2U8 911 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 FAM170AA1A519 330 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 GHRP10912 638 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 PPM1KQ8N3J5 372 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 THOC1Q96FV9 657 aaKnown RBP14.04□□□□□ -0.16
DNMT1-203ENST00000540357 MAK16Q9BXY0 300 aaKnown RBP14.04□□□□□ -0.16
DNMT1-203ENST00000540357 UBXN6Q9BZV1 441 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 SUCLA2Q9P2R7 463 aaPredicted RBP14.04□□□□□ -0.16
DNMT1-203ENST00000540357 TCRBV5S4A2TA0A5A2 114 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 MYMKA6NI61 221 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 LRRN2O75325 713 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 GSTA1P08263 222 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 CYP4A11Q02928 519 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 SH2D4BQ5SQS7 431 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 ODR4Q5SWX8 454 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 PNMA2Q9UL42 364 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 USP15Q9Y4E8 981 aaPredicted RBP14.04□□□□□ -0.16
DNMT1-203ENST00000540357 GLI1P08151 1106 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 MFSD14BQ5SR56 506 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 CD302Q8IX05 232 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 PALM2Q8IXS6 379 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 CCDC89Q8N998 374 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 RAPGEF5Q92565 580 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 PFASO15067 1338 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 MAPK4P31152 587 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 UBE2SQ16763 222 aa14.04□□□□□ -0.16
DNMT1-203ENST00000540357 POC1B-GALNT4F8VUJ3 575 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 SLC26A4O43511 780 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 GPC5P78333 572 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 SNX1Q13596 522 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 ERFEQ4G0M1 354 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 RASIP1Q5U651 963 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 RNF207Q6ZRF8 634 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 SPATA21Q7Z572 469 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 HDAC7Q8WUI4 952 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 VCX3AQ9NNX9 186 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 UBE2TQ9NPD8 197 aaPredicted RBP14.03□□□□□ -0.16
DNMT1-203ENST00000540357 TBK1Q9UHD2 729 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 KAT6BQ8WYB5 2073 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 E9PMD0 336 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 PJA2O43164 708 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 SHOX2O60902 331 aaPredicted RBP14.03□□□□□ -0.16
DNMT1-203ENST00000540357 CYP19A1P11511 503 aaPredicted RBP14.03□□□□□ -0.16
DNMT1-203ENST00000540357 SPARCL1Q14515 664 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 TTMPQ5BVD1 217 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 MAEAQ7L5Y9 396 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 FBXO11Q86XK2 927 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 ACTRT1Q8TDG2 376 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.03□□□□□ -0.16
DNMT1-203ENST00000540357 TGS1Q96RS0 853 aaKnown RBP14.03□□□□□ -0.16
DNMT1-203ENST00000540357 INTUQ9ULD6 942 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 XRN1Q8IZH2 1706 aaKnown RBP14.03□□□□□ -0.16
DNMT1-203ENST00000540357 STXBP3O00186 592 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 CES2O00748 559 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 KIF3CO14782 793 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 RFX1P22670 979 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 MEI1Q5TIA1 1274 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 TEX9Q8N6V9 391 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 EIF1ADQ8N9N8 165 aaKnown RBP14.03□□□□□ -0.16
DNMT1-203ENST00000540357 BACH1O14867 736 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 ANKRD20A8PQ5CZ79 823 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 CFAP157Q5JU67 520 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 MEX3CQ5U5Q3 659 aaKnown RBP14.03□□□□□ -0.16
DNMT1-203ENST00000540357 DCUN1D2Q6PH85 259 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 PARVGQ9HBI0 331 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 STOML1Q9UBI4 398 aa14.03□□□□□ -0.16
DNMT1-203ENST00000540357 EXOC1LA0A1B0GW35 172 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 GNPATO15228 680 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 SLC16A3O15427 465 aaKnown RBP14.02□□□□□ -0.16
DNMT1-203ENST00000540357 PMS1P54277 932 aaKnown RBP14.02□□□□□ -0.16
DNMT1-203ENST00000540357 EDRF1Q3B7T1 1238 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 ZNF507Q8TCN5 953 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 AMNQ9BXJ7 453 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 MOV10L1Q9BXT6 1211 aaKnown RBP14.02□□□□□ -0.16
DNMT1-203ENST00000540357 ATP6V0A4Q9HBG4 840 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 ETNK1Q9HBU6 452 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 TPX2Q9ULW0 747 aaKnown RBP14.02□□□□□ -0.16
DNMT1-203ENST00000540357 KDM6AO15550 1401 aaPredicted RBP14.02□□□□□ -0.16
DNMT1-203ENST00000540357 MAP3K7O43318 606 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 SOX5P35711 763 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 KLHDC7AQ5VTJ3 777 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 CCDC137Q6PK04 289 aaKnown RBP14.02□□□□□ -0.16
DNMT1-203ENST00000540357 SFR1Q86XK3 245 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 YIPF3Q9GZM5 350 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 WNT8AQ9H1J5 351 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 TMEM206Q9H813 350 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 TMEM260Q9NX78 707 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 DDX20Q9UHI6 824 aaKnown RBP14.02□□□□□ -0.16
DNMT1-203ENST00000540357 ZNF148Q9UQR1 794 aa14.02□□□□□ -0.16
DNMT1-203ENST00000540357 LOC102724428A0A0B4J2F2 783 aa14.02□□□□□ -0.17
DNMT1-203ENST00000540357 MEIS1O00470 390 aa14.02□□□□□ -0.17
DNMT1-203ENST00000540357 BRAFP15056 766 aa14.02□□□□□ -0.17
DNMT1-203ENST00000540357 UCHL3P15374 230 aa14.02□□□□□ -0.17
DNMT1-203ENST00000540357 NSFP46459 744 aaKnown RBP14.02□□□□□ -0.17
DNMT1-203ENST00000540357 SIK1P57059 783 aa14.02□□□□□ -0.17
DNMT1-203ENST00000540357 ADCY1Q08828 1119 aa14.02□□□□□ -0.17
DNMT1-203ENST00000540357 TRMT10CQ7L0Y3 403 aaKnown RBP14.02□□□□□ -0.17
DNMT1-203ENST00000540357 DDX42Q86XP3 938 aaKnown RBP eCLIP14.02□□□□□ -0.17
DNMT1-203ENST00000540357 TRIM51Q9BSJ1 452 aa14.02□□□□□ -0.17
DNMT1-203ENST00000540357 ROPN1BQ9BZX4 212 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms