RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ADSSL1Q8N142 457 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 RAD54LQ92698 747 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 HPS3Q969F9 1004 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 TBC1D31Q96DN5 1066 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 JRKLQ9Y4A0 524 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 PPFIA4O75335 1185 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 TADA3O75528 432 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 RHOBTB3O94955 611 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 FCER1AP12319 257 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 SYCE1Q8N0S2 351 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 MICAL1Q8TDZ2 1067 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 DHTKD1Q96HY7 919 aaPredicted RBP10.87□□□□□ -0.67
TRAF1-202ENST00000540010 IFT74Q96LB3 600 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 FNBP1Q96RU3 617 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 PICK1Q9NRD5 415 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 ABHD10Q9NUJ1 306 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRAF1-202ENST00000540010 RPS12P25398 132 aaKnown RBP10.87□□□□□ -0.67
TRAF1-202ENST00000540010 PABPC4Q13310 644 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRAF1-202ENST00000540010 PDCLQ13371 301 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 MTMR3Q13615 1198 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 TTC16Q8NEE8 873 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 DDX12PQ92771 950 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 SMC6Q96SB8 1091 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 C7orf25Q9BPX7 421 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 POLD4Q9HCU8 107 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 STIM2Q9P246 746 aa10.87□□□□□ -0.67
TRAF1-202ENST00000540010 FRMD3A2A2Y4 597 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 IFNB1P01574 187 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 ALAS1P13196 640 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 NNTQ13423 1086 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 PRKG1Q13976 671 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 FAM133AQ8N9E0 248 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 NUDT12Q9BQG2 462 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 MMTAG2Q9BU76 263 aaKnown RBP10.86□□□□□ -0.67
TRAF1-202ENST00000540010 FEM1BQ9UK73 627 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 NFU1Q9UMS0 254 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 ATP8A1Q9Y2Q0 1164 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 A0A1B0GTH6 734 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 TTC26A0AVF1 554 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 POTEB3A0JP26 581 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 MYMKA6NI61 221 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 POTECB2RU33 542 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 E9PMD0 336 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 MEIS1O00470 390 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 MEIS2O14770 477 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 RPSAP08865 295 aaKnown RBP10.86□□□□□ -0.67
TRAF1-202ENST00000540010 NR2F2P24468 414 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 CCNE1P24864 410 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 CLK2P49760 499 aaKnown RBP10.86□□□□□ -0.67
TRAF1-202ENST00000540010 KIF11P52732 1056 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 EPHB4P54760 987 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 ATP11AP98196 1134 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 STK4Q13043 487 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 NR1I3Q14994 352 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 DCAF15Q66K64 600 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 POTEBQ6S5H4 581 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 GIMAP8Q8ND71 665 aaPredicted RBP10.86□□□□□ -0.67
TRAF1-202ENST00000540010 GLIS2Q9BZE0 524 aaPredicted RBP10.86□□□□□ -0.67
TRAF1-202ENST00000540010 RAB17Q9H0T7 212 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 ESYT3A0FGR9 886 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 ZNF131P52739 623 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 TTLL12Q14166 644 aaPredicted RBP10.86□□□□□ -0.67
TRAF1-202ENST00000540010 EXOC3L4Q17RC7 722 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 TAOK1Q7L7X3 1001 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 MB21D1Q8N884 522 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 ARHGEF2Q92974 986 aaKnown RBP10.86□□□□□ -0.67
TRAF1-202ENST00000540010 MED15Q96RN5 788 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 HACL1Q9UJ83 578 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 CNTNAP1P78357 1384 aa10.86□□□□□ -0.67
TRAF1-202ENST00000540010 NFKBIEO00221 500 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 STX2P32856 288 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 VSNL1P62760 191 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 FKBP3Q00688 224 aaKnown RBP10.85□□□□□ -0.67
TRAF1-202ENST00000540010 UNC13DQ70J99 1090 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 HAS1Q92839 578 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 PNMA5Q96PV4 448 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 TRIM7Q9C029 511 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 DEFB129Q9H1M3 183 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 NDST4Q9H3R1 872 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 INTS13Q9NVM9 706 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 ADD3Q9UEY8 706 aaKnown RBP10.85□□□□□ -0.67
TRAF1-202ENST00000540010 CTIFO43310 598 aaKnown RBP10.85□□□□□ -0.67
TRAF1-202ENST00000540010 PLA2G4BP0C869 781 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 PRAMEF18Q5VWM3 479 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 LDHDQ86WU2 507 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 MTMR14Q8NCE2 650 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 CCDC127Q96BQ5 260 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 HOOK2Q96ED9 719 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 CHP1Q99653 195 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.85□□□□□ -0.67
TRAF1-202ENST00000540010 BCRP11274 1271 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 GGCXP38435 758 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 SLCO1A2P46721 670 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 MAN2A1Q16706 1144 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 CDKAL1Q5VV42 579 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 BTNL9Q6UXG8 535 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 TCP11Q8WWU5 503 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 AP1M1Q9BXS5 423 aa10.85□□□□□ -0.67
TRAF1-202ENST00000540010 CEP83Q9Y592 693 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms