RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 PARVGQ9HBI0 331 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 THSD7BQ9C0I4 1608 aa18.67■□□□□ 0.58
COPS3-212ENST00000539941 ZNF157P51786 506 aaPredicted RBP18.66■□□□□ 0.58
COPS3-212ENST00000539941 ACTR2P61160 394 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 LRRC41Q15345 812 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 BMT2Q1RMZ1 405 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 ZCWPW2Q504Y3 356 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 ABHD15Q6UXT9 468 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 EPM2AIP1Q7L775 607 aaPredicted RBP18.66■□□□□ 0.58
COPS3-212ENST00000539941 CCDC43Q96MW1 224 aaKnown RBP18.66■□□□□ 0.58
COPS3-212ENST00000539941 EIF3DO15371 548 aaKnown RBP eCLIP18.66■□□□□ 0.58
COPS3-212ENST00000539941 ATG7O95352 703 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 COPB1P53618 953 aaKnown RBP18.66■□□□□ 0.58
COPS3-212ENST00000539941 NOGQ13253 232 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 UGCGQ16739 394 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 OTUD6AQ7L8S5 288 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 FILIP1Q7Z7B0 1213 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 TNS4Q8IZW8 715 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 CCDC150Q8NCX0 1101 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 SCFD1Q8WVM8 642 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 TBC1D7Q9P0N9 293 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 UBE4BO95155 1302 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 PLXNB2O15031 1838 aa18.66■□□□□ 0.58
COPS3-212ENST00000539941 RSPH10B2B2RC85 870 aa18.65■□□□□ 0.58
COPS3-212ENST00000539941 SUPT20HL2P0C7V6 817 aa18.65■□□□□ 0.58
COPS3-212ENST00000539941 RSPH10BP0C881 870 aa18.65■□□□□ 0.58
COPS3-212ENST00000539941 UBA1P22314 1058 aaKnown RBP18.65■□□□□ 0.58
COPS3-212ENST00000539941 SP2Q02086 613 aa18.65■□□□□ 0.58
COPS3-212ENST00000539941 DNTTIP2Q5QJE6 756 aaKnown RBP18.65■□□□□ 0.58
COPS3-212ENST00000539941 STXBP4Q6ZWJ1 553 aa18.65■□□□□ 0.58
COPS3-212ENST00000539941 GLIS3Q8NEA6 775 aa18.65■□□□□ 0.58
COPS3-212ENST00000539941 CCDC102AQ96A19 550 aa18.65■□□□□ 0.58
COPS3-212ENST00000539941 MRPL44Q9H9J2 332 aaKnown RBP18.65■□□□□ 0.58
COPS3-212ENST00000539941 GABBR1Q9UBS5 961 aa18.65■□□□□ 0.58
COPS3-212ENST00000539941 IVNS1ABPQ9Y6Y0 642 aa18.65■□□□□ 0.58
COPS3-212ENST00000539941 DOCK5Q9H7D0 1870 aa18.64■□□□□ 0.58
COPS3-212ENST00000539941 MAPK4P31152 587 aa18.64■□□□□ 0.57
COPS3-212ENST00000539941 GABPB1Q06547 395 aaPredicted RBP18.64■□□□□ 0.57
COPS3-212ENST00000539941 EDRF1Q3B7T1 1238 aa18.64■□□□□ 0.57
COPS3-212ENST00000539941 SPECC1LQ69YQ0 1117 aa18.64■□□□□ 0.57
COPS3-212ENST00000539941 CYFIP1Q7L576 1253 aa18.64■□□□□ 0.57
COPS3-212ENST00000539941 ZNF467Q7Z7K2 595 aaPredicted RBP18.64■□□□□ 0.57
COPS3-212ENST00000539941 MYCT1Q8N699 235 aa18.64■□□□□ 0.57
COPS3-212ENST00000539941 FGFBP2Q9BYJ0 223 aa18.64■□□□□ 0.57
COPS3-212ENST00000539941 KCTD10Q9H3F6 313 aa18.64■□□□□ 0.57
COPS3-212ENST00000539941 KCNF1Q9H3M0 494 aa18.64■□□□□ 0.57
COPS3-212ENST00000539941 IGSF9BQ9UPX0 1349 aa18.64■□□□□ 0.57
COPS3-212ENST00000539941 N4BP3O15049 544 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 FARP2O94887 1054 aaPredicted RBP18.63■□□□□ 0.57
COPS3-212ENST00000539941 MAPTP10636 758 aaKnown RBP18.63■□□□□ 0.57
COPS3-212ENST00000539941 INHBEP58166 350 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 FAM193AP78312 1265 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 FKBP3Q00688 224 aaKnown RBP18.63■□□□□ 0.57
COPS3-212ENST00000539941 ZNF792Q3KQV3 632 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 LRRC8AQ8IWT6 810 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 PDCL2Q8N4E4 241 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 ZNF507Q8TCN5 953 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 CNOT6LQ96LI5 555 aaKnown RBP18.63■□□□□ 0.57
COPS3-212ENST00000539941 CEP63Q96MT8 703 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 MYH11P35749 1972 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 PLXNA1Q9UIW2 1896 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 ITIH6Q6UXX5 1313 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 SYNGAP1Q96PV0 1343 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 HIP1RO75146 1068 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 SLC10A3P09131 477 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 ADORA2AP29274 412 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 PBX1P40424 430 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 MAPK7Q13164 816 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 KNOP1Q1ED39 458 aaKnown RBP18.63■□□□□ 0.57
COPS3-212ENST00000539941 XKR9Q5GH70 373 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 SWSAP1Q6NVH7 229 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 METTL7BQ6UX53 244 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 LRRC55Q6ZSA7 311 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 CCDC60Q8IWA6 550 aaPredicted RBP18.63■□□□□ 0.57
COPS3-212ENST00000539941 ZC3H3Q8IXZ2 948 aaKnown RBP18.63■□□□□ 0.57
COPS3-212ENST00000539941 ZNF830Q96NB3 372 aaPredicted RBP18.63■□□□□ 0.57
COPS3-212ENST00000539941 BEGAINQ9BUH8 593 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 BCAS3Q9H6U6 928 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 TAB2Q9NYJ8 693 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 LARSQ9P2J5 1176 aaKnown RBP18.63■□□□□ 0.57
COPS3-212ENST00000539941 TRAF3IP3Q9Y228 551 aa18.63■□□□□ 0.57
COPS3-212ENST00000539941 ADGRA2Q96PE1 1338 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 MYH9P35579 1960 aaKnown RBP18.62■□□□□ 0.57
COPS3-212ENST00000539941 IGKV6D-21A0A0A0MT36 114 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 PDXKO00764 312 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 ZNF862O60290 1169 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 GNA14O95837 355 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 CASP5P51878 434 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 TBX2Q13207 712 aaPredicted RBP18.62■□□□□ 0.57
COPS3-212ENST00000539941 ALCAMQ13740 583 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 XKR3Q5GH77 459 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 ANO5Q75V66 913 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 FAM178BQ8IXR5 827 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 SLC17A8Q8NDX2 589 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 CACTINQ8WUQ7 758 aaKnown RBP18.62■□□□□ 0.57
COPS3-212ENST00000539941 DRC1Q96MC2 740 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 SPTLC3Q9NUV7 552 aa18.62■□□□□ 0.57
COPS3-212ENST00000539941 DDX41Q9UJV9 622 aaKnown RBP18.62■□□□□ 0.57
COPS3-212ENST00000539941 DIS3Q9Y2L1 958 aaKnown RBP18.62■□□□□ 0.57
COPS3-212ENST00000539941 MAFBQ9Y5Q3 323 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms