RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 TSR1Q2NL82 804 aaKnown RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 P3H1Q32P28 736 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 SMUG1Q53HV7 270 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 UMODL1Q5DID0 1318 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 FIGNQ5HY92 759 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 FYB2Q5VWT5 728 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 PHLDB3Q6NSJ2 640 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 RWDD4Q6NW29 188 aaKnown RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 DUS1LQ6P1R4 473 aaKnown RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 ADGRG6Q86SQ4 1221 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 XRN1Q8IZH2 1706 aaKnown RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 ARHGEF28Q8N1W1 1705 aaKnown RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 ESX1Q8N693 406 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 LRRC8CQ8TDW0 803 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 GAB3Q8WWW8 586 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 SEC14L1Q92503 715 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 USP6NLQ92738 828 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 TAF4BQ92750 862 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 DPF3Q92784 378 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 TUBB6Q9BUF5 446 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 ANKRD2Q9GZV1 360 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 SEPT10Q9P0V9 454 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 STX18Q9P2W9 335 aaKnown RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 CRNNQ9UBG3 495 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 RABL2AQ9UBK7 228 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 LNPEPQ9UIQ6 1025 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 FBXO9Q9UK97 447 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 GTF3C4Q9UKN8 822 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 AGAP1Q9UPQ3 857 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 CHMP2BQ9UQN3 213 aa6.63□□□□□ -1.35
SNHG1-211ENST00000539921 REXO2Q9Y3B8 237 aaKnown RBP6.63□□□□□ -1.35
SNHG1-211ENST00000539921 ARAP3Q8WWN8 1544 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 A0A1W2PP64 1363 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-211ENST00000539921 A0A1W2PQJ5 194 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 CCDC169A6NNP5 214 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 A8MXQ7 604 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 SLC22A1O15245 554 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 RNMTO43148 476 aaKnown RBP6.62□□□□□ -1.35
SNHG1-211ENST00000539921 PJA2O43164 708 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 MAP3K7O43318 606 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 ATP9AO75110 1047 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 PDHA1P08559 390 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 GSTT2P0CG29 244 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 GSTT2BP0CG30 244 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 CCNCP24863 283 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 SERPINB3P29508 390 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 CDC25CP30307 473 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 HNRNPH3P31942 346 aaKnown RBP6.62□□□□□ -1.35
SNHG1-211ENST00000539921 BASP1P80723 227 aaKnown RBP6.62□□□□□ -1.35
SNHG1-211ENST00000539921 ARHGAP4P98171 946 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 MDM2Q00987 491 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-211ENST00000539921 GUCY1B3Q02153 619 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 MAP3K10Q02779 954 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 RELAQ04206 551 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 PPP2R5EQ16537 467 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 ZNF423Q2M1K9 1284 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 ARL13BQ3SXY8 428 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 EAPPQ56P03 285 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-211ENST00000539921 CLEC4GQ6UXB4 293 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 AGMOQ6ZNB7 445 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 COL23A1Q86Y22 540 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-211ENST00000539921 LURAP1LQ8IV03 231 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 GSPT2Q8IYD1 628 aaKnown RBP6.62□□□□□ -1.35
SNHG1-211ENST00000539921 MYO1HQ8N1T3 1032 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 ALLCQ8N6M5 410 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 SPERTQ8NA61 448 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 STARD8Q92502 1023 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 FERMT2Q96AC1 680 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 MED30Q96HR3 178 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 ZFRQ96KR1 1074 aaKnown RBP6.62□□□□□ -1.35
SNHG1-211ENST00000539921 LRGUKQ96M69 825 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 TRIM55Q9BYV6 548 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 KLHL4Q9C0H6 718 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 GBA3Q9H227 469 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 TPK1Q9H3S4 243 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 PFDN4Q9NQP4 134 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 SAR1AQ9NR31 198 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 ATAD3AQ9NVI7 634 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-211ENST00000539921 SEL1LQ9UBV2 794 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 PRKAG3Q9UGI9 489 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 SEC63Q9UGP8 760 aaKnown RBP6.62□□□□□ -1.35
SNHG1-211ENST00000539921 PCSK1NQ9UHG2 260 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 CNOT7Q9UIV1 285 aaKnown RBP6.62□□□□□ -1.35
SNHG1-211ENST00000539921 ANGPTL2Q9UKU9 493 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 MTUS1Q9ULD2 1270 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 PADI4Q9UM07 663 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 CAPN11Q9UMQ6 739 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 GUCA1BQ9UMX6 200 aa6.62□□□□□ -1.35
SNHG1-211ENST00000539921 SCAF8Q9UPN6 1271 aaKnown RBP6.62□□□□□ -1.35
SNHG1-211ENST00000539921 TMEM131LA2VDJ0 1609 aa6.61□□□□□ -1.35
SNHG1-211ENST00000539921 TULP4Q9NRJ4 1543 aa6.61□□□□□ -1.35
SNHG1-211ENST00000539921 WDR19Q8NEZ3 1342 aa6.61□□□□□ -1.35
SNHG1-211ENST00000539921 PTPDC1A2A3K4 754 aa6.61□□□□□ -1.35
SNHG1-211ENST00000539921 GOLGA8CPA6NN73 597 aa6.61□□□□□ -1.35
SNHG1-211ENST00000539921 PHF20L1A8MW92 1017 aa6.61□□□□□ -1.35
SNHG1-211ENST00000539921 ERVV-2B6SEH9 535 aa6.61□□□□□ -1.35
SNHG1-211ENST00000539921 FAM47E-STBD1D6RA91 191 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms