RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 CETN3O15182 167 aa24.76■■□□□ 1.55
HOMER3-204ENST00000539827 EIF3JO75822 258 aaKnown RBP24.76■■□□□ 1.55
HOMER3-204ENST00000539827 NR2F2P24468 414 aa24.76■■□□□ 1.55
HOMER3-204ENST00000539827 SP2Q02086 613 aa24.76■■□□□ 1.55
HOMER3-204ENST00000539827 FAM178BQ8IXR5 827 aa24.76■■□□□ 1.55
HOMER3-204ENST00000539827 ERGIC2Q96RQ1 377 aa24.76■■□□□ 1.55
HOMER3-204ENST00000539827 IKZF4Q9H2S9 585 aa24.76■■□□□ 1.55
HOMER3-204ENST00000539827 RRAGCQ9HB90 399 aa24.76■■□□□ 1.55
HOMER3-204ENST00000539827 JPH1Q9HDC5 661 aaPredicted RBP24.76■■□□□ 1.55
HOMER3-204ENST00000539827 SLC9A2Q9UBY0 812 aa24.76■■□□□ 1.55
HOMER3-204ENST00000539827 PDXKO00764 312 aa24.75■■□□□ 1.55
HOMER3-204ENST00000539827 SLC25A27O95847 323 aa24.75■■□□□ 1.55
HOMER3-204ENST00000539827 MKRN3Q13064 507 aaKnown RBP24.75■■□□□ 1.55
HOMER3-204ENST00000539827 XKR9Q5GH70 373 aa24.75■■□□□ 1.55
HOMER3-204ENST00000539827 NYAP1Q6ZVC0 841 aa24.75■■□□□ 1.55
HOMER3-204ENST00000539827 ZNF720Q7Z2F6 126 aa24.75■■□□□ 1.55
HOMER3-204ENST00000539827 TYW1Q9NV66 732 aaKnown RBP24.75■■□□□ 1.55
HOMER3-204ENST00000539827 MYH11P35749 1972 aa24.75■■□□□ 1.55
HOMER3-204ENST00000539827 CLIC2O15247 247 aa24.74■■□□□ 1.55
HOMER3-204ENST00000539827 EIF3DO15371 548 aaKnown RBP eCLIP24.74■■□□□ 1.55
HOMER3-204ENST00000539827 GNA14O95837 355 aa24.74■■□□□ 1.55
HOMER3-204ENST00000539827 NPEPPSP55786 919 aa24.74■■□□□ 1.55
HOMER3-204ENST00000539827 RAD9BQ6WBX8 426 aa24.74■■□□□ 1.55
HOMER3-204ENST00000539827 NAA15Q9BXJ9 866 aaKnown RBP24.74■■□□□ 1.55
HOMER3-204ENST00000539827 CAPN11Q9UMQ6 739 aa24.74■■□□□ 1.55
HOMER3-204ENST00000539827 SWSAP1Q6NVH7 229 aa24.74■■□□□ 1.55
HOMER3-204ENST00000539827 SMAP1Q8IYB5 467 aaPredicted RBP24.74■■□□□ 1.55
HOMER3-204ENST00000539827 FAM133AQ8N9E0 248 aa24.74■■□□□ 1.55
HOMER3-204ENST00000539827 DESI2Q9BSY9 194 aa24.74■■□□□ 1.55
HOMER3-204ENST00000539827 PPP2R2CQ9Y2T4 447 aa24.74■■□□□ 1.55
HOMER3-204ENST00000539827 LUC7L2Q9Y383 392 aaKnown RBP24.74■■□□□ 1.55
HOMER3-204ENST00000539827 PGK2P07205 417 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 PSAPP07602 524 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 ICAM3P32942 547 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 ACTR2P61160 394 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 REXO1L1PQ8IX06 675 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 CCDC155Q8N6L0 562 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 NUP58Q9BVL2 599 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 ANKEF1Q9NU02 776 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 ZMYM2Q9UBW7 1377 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 TGFB1I1O43294 461 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 CCP110O43303 1012 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 CYP2C8P10632 490 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 TRIM21P19474 475 aaKnown RBP24.73■■□□□ 1.55
HOMER3-204ENST00000539827 CYFIP1Q7L576 1253 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 ZNF592Q92610 1267 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 TTYH3Q9C0H2 523 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 SIK3Q9Y2K2 1263 aa24.73■■□□□ 1.55
HOMER3-204ENST00000539827 ZNF862O60290 1169 aa24.72■■□□□ 1.55
HOMER3-204ENST00000539827 NR3C1P04150 777 aa24.72■■□□□ 1.55
HOMER3-204ENST00000539827 FECHP22830 423 aa24.72■■□□□ 1.55
HOMER3-204ENST00000539827 MARSP56192 900 aaKnown RBP24.72■■□□□ 1.55
HOMER3-204ENST00000539827 ERVK-24P63145 666 aa24.72■■□□□ 1.55
HOMER3-204ENST00000539827 WDR78Q5VTH9 848 aa24.72■■□□□ 1.55
HOMER3-204ENST00000539827 ANO5Q75V66 913 aa24.72■■□□□ 1.55
HOMER3-204ENST00000539827 TRIM59Q8IWR1 403 aa24.72■■□□□ 1.55
HOMER3-204ENST00000539827 SMCR8Q8TEV9 937 aaPredicted RBP24.72■■□□□ 1.55
HOMER3-204ENST00000539827 AGPAT5Q9NUQ2 364 aa24.72■■□□□ 1.55
HOMER3-204ENST00000539827 WDR81Q562E7 1941 aa24.71■■□□□ 1.55
HOMER3-204ENST00000539827 ZSCAN12O43309 604 aa24.71■■□□□ 1.55
HOMER3-204ENST00000539827 EDNRBP24530 442 aa24.71■■□□□ 1.55
HOMER3-204ENST00000539827 ABHD15Q6UXT9 468 aa24.71■■□□□ 1.55
HOMER3-204ENST00000539827 OR8K1Q8NGG5 319 aa24.71■■□□□ 1.55
HOMER3-204ENST00000539827 GPRC5CQ9NQ84 441 aa24.71■■□□□ 1.55
HOMER3-204ENST00000539827 TERF1P54274 439 aa24.71■■□□□ 1.55
HOMER3-204ENST00000539827 STXBP4Q6ZWJ1 553 aa24.71■■□□□ 1.55
HOMER3-204ENST00000539827 EEPD1Q7L9B9 569 aa24.71■■□□□ 1.55
HOMER3-204ENST00000539827 CCDC60Q8IWA6 550 aaPredicted RBP24.71■■□□□ 1.55
HOMER3-204ENST00000539827 ATP6V0A1Q93050 837 aa24.71■■□□□ 1.55
HOMER3-204ENST00000539827 MMP19Q99542 508 aa24.71■■□□□ 1.55
HOMER3-204ENST00000539827 MMRN2Q9H8L6 949 aa24.71■■□□□ 1.55
HOMER3-204ENST00000539827 PCDHB13Q9Y5F0 798 aa24.71■■□□□ 1.55
HOMER3-204ENST00000539827 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.71■■□□□ 1.55
HOMER3-204ENST00000539827 K7ENM7 598 aa24.7■■□□□ 1.54
HOMER3-204ENST00000539827 STBD1O95210 358 aa24.7■■□□□ 1.54
HOMER3-204ENST00000539827 COPB2P35606 906 aa24.7■■□□□ 1.54
HOMER3-204ENST00000539827 MIS18BP1Q6P0N0 1132 aa24.7■■□□□ 1.54
HOMER3-204ENST00000539827 TMTC1Q8IUR5 882 aa24.7■■□□□ 1.54
HOMER3-204ENST00000539827 RETREG2Q8NC44 543 aa24.7■■□□□ 1.54
HOMER3-204ENST00000539827 GBA2Q9HCG7 927 aaPredicted RBP24.7■■□□□ 1.54
HOMER3-204ENST00000539827 UBE4BO95155 1302 aa24.7■■□□□ 1.54
HOMER3-204ENST00000539827 CASP4P49662 377 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 ERVK-9P63128 1117 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 FAM102BQ5T8I3 360 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 LARSQ9P2J5 1176 aaKnown RBP24.69■■□□□ 1.54
HOMER3-204ENST00000539827 AKAP3O75969 853 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 SUPT20HL2P0C7V6 817 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 PLS3P13797 630 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 RPL13P26373 211 aaKnown RBP24.69■■□□□ 1.54
HOMER3-204ENST00000539827 KCNMA1Q12791 1236 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 KCTD2Q14681 263 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 CYP26C1Q6V0L0 522 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 OTUD6AQ7L8S5 288 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 CEP170P1Q96L14 293 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 FGD4Q96M96 766 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 DNAJC7Q99615 494 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 CHP1Q99653 195 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 STRA6Q9BX79 667 aa24.69■■□□□ 1.54
HOMER3-204ENST00000539827 FAM207AQ9NSI2 230 aaPredicted RBP24.69■■□□□ 1.54
HOMER3-204ENST00000539827 CCL15-CCL14A0A0B4J2E2 113 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms