RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 UNCXA6NJT0 531 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 H0YCG3 227 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 CXCL11O14625 94 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 KRT86O43790 486 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 USO1O60763 962 aaKnown RBP11.19□□□□□ -0.62
SPARC-209ENST00000539687 USP2O75604 605 aaPredicted RBP11.19□□□□□ -0.62
SPARC-209ENST00000539687 NR3C1P04150 777 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 EIF2AK2P19525 551 aaKnown RBP11.19□□□□□ -0.62
SPARC-209ENST00000539687 ANXA13P27216 316 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
SPARC-209ENST00000539687 MRPS9P82933 396 aaKnown RBP11.19□□□□□ -0.62
SPARC-209ENST00000539687 BAATQ14032 418 aaPredicted RBP11.19□□□□□ -0.62
SPARC-209ENST00000539687 PTPN21Q16825 1174 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 TRIM65Q6PJ69 517 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 PADI6Q6TGC4 694 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 SLC30A10Q6XR72 485 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 NELFCDQ8IXH7 590 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 ANKRD13AQ8IZ07 590 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 TNS4Q8IZW8 715 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 SP7Q8TDD2 431 aaPredicted RBP11.19□□□□□ -0.62
SPARC-209ENST00000539687 VTI1AQ96AJ9 217 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 CCDC42Q96M95 316 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 TAAR1Q96RJ0 339 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 ST6GALNAC4Q9H4F1 302 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 MMRN2Q9H8L6 949 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 C17orf75Q9HAS0 396 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 TBC1D7Q9P0N9 293 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 MYO6Q9UM54 1294 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 PLAGL2Q9UPG8 496 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 SSC5DA1L4H1 1573 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 PARP14Q460N5 1801 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 SSU72P8A0A1W2PR75 194 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 TESPA1A2RU30 521 aaPredicted RBP11.18□□□□□ -0.62
SPARC-209ENST00000539687 DHX15O43143 795 aaKnown RBP11.18□□□□□ -0.62
SPARC-209ENST00000539687 TOMM70O94826 608 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 AFPP02771 609 aaKnown RBP11.18□□□□□ -0.62
SPARC-209ENST00000539687 PSAPP07602 524 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 NR3C2P08235 984 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 MYCLP12524 364 aaPredicted RBP11.18□□□□□ -0.62
SPARC-209ENST00000539687 PSMC2P35998 433 aaKnown RBP11.18□□□□□ -0.62
SPARC-209ENST00000539687 HIRAP54198 1017 aaPredicted RBP11.18□□□□□ -0.62
SPARC-209ENST00000539687 ERVK-24P63145 666 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 PPP2R5AQ15172 486 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 ODR4Q5SWX8 454 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 LBX2Q6XYB7 198 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 ZNF720Q7Z2F6 126 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 KIAA1328Q86T90 577 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 ERO1BQ86YB8 467 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 SLC9A9Q8IVB4 645 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 MNS1Q8NEH6 495 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 PIGOQ8TEQ8 1089 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 GTF3C2Q8WUA4 911 aaPredicted RBP11.18□□□□□ -0.62
SPARC-209ENST00000539687 L3MBTL3Q96JM7 780 aaPredicted RBP11.18□□□□□ -0.62
SPARC-209ENST00000539687 INPP4AQ96PE3 977 aaPredicted RBP11.18□□□□□ -0.62
SPARC-209ENST00000539687 DEF6Q9H4E7 631 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 PLCB1Q9NQ66 1216 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 FBXL5Q9UKA1 691 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 SCAF8Q9UPN6 1271 aaKnown RBP11.18□□□□□ -0.62
SPARC-209ENST00000539687 EXOC7Q9UPT5 735 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 FRMD4BQ9Y2L6 1034 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 PCDHA10Q9Y5I2 948 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 BZW2Q9Y6E2 419 aaKnown RBP11.18□□□□□ -0.62
SPARC-209ENST00000539687 SNCAIPQ9Y6H5 919 aa11.18□□□□□ -0.62
SPARC-209ENST00000539687 LOC102724159A0A0B4J2E5 919 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 CTAGE9A4FU28 777 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 IQCA1LA6NCM1 817 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 SPDYE16A6NNV3 312 aaPredicted RBP11.17□□□□□ -0.62
SPARC-209ENST00000539687 N4BP1O75113 896 aaKnown RBP11.17□□□□□ -0.62
SPARC-209ENST00000539687 URI1O94763 535 aaPredicted RBP11.17□□□□□ -0.62
SPARC-209ENST00000539687 SLC25A27O95847 323 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 MYBP10242 640 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 PLS3P13797 630 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 RFX1P22670 979 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 YWHABP31946 246 aaKnown RBP11.17□□□□□ -0.62
SPARC-209ENST00000539687 RARRES1P49788 294 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 RAD51AP2Q09MP3 1159 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 ITGB3BPQ13352 177 aaPredicted RBP11.17□□□□□ -0.62
SPARC-209ENST00000539687 VGLL4Q14135 290 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 TMEM132BQ14DG7 1078 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 PWP2Q15269 919 aaKnown RBP11.17□□□□□ -0.62
SPARC-209ENST00000539687 SLC9C1Q4G0N8 1177 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 MIS18BP1Q6P0N0 1132 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 FASTKD5Q7L8L6 764 aaKnown RBP11.17□□□□□ -0.62
SPARC-209ENST00000539687 RIOX2Q8IUF8 465 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 C12orf56Q8IXR9 622 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 PDCL2Q8N4E4 241 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 BANK1Q8NDB2 785 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 IL31RAQ8NI17 732 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 UIMC1Q96RL1 719 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 DESI2Q9BSY9 194 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 MOV10L1Q9BXT6 1211 aaKnown RBP11.17□□□□□ -0.62
SPARC-209ENST00000539687 GBP3Q9H0R5 595 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 NHEJ1Q9H9Q4 299 aaPredicted RBP11.17□□□□□ -0.62
SPARC-209ENST00000539687 CYP39A1Q9NYL5 469 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 PPME1Q9Y570 386 aa11.17□□□□□ -0.62
SPARC-209ENST00000539687 LOC285556D6RIA3 1793 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 ASTN1O14525 1302 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 A0A0G2JLL6 359 aaPredicted RBP11.16□□□□□ -0.62
SPARC-209ENST00000539687 SPDYE5A6NIY4 337 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 EFCAB8A8MWE9 144 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms