RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 INPP4AQ96PE3 977 aaPredicted RBP15.4■□□□□ 0.06
UBE3B-210ENST00000539599 OSGEPQ9NPF4 335 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 AIPL1Q9NZN9 384 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 ZMYM2Q9UBW7 1377 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 CEP104O60308 925 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 ITGA4P13612 1032 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 MARSP56192 900 aaKnown RBP15.4■□□□□ 0.06
UBE3B-210ENST00000539599 EPHA7Q15375 998 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 SLC27A3Q5K4L6 730 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 KRT27Q7Z3Y8 459 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 OR2W6PQ8NHA6 318 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 FAM76AQ8TAV0 307 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 NAGPAQ9UK23 515 aa15.4■□□□□ 0.06
UBE3B-210ENST00000539599 TRPC5Q9UL62 973 aaPredicted RBP15.4■□□□□ 0.06
UBE3B-210ENST00000539599 MYO3BQ8WXR4 1341 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 ONECUT3O60422 494 aaPredicted RBP15.39■□□□□ 0.05
UBE3B-210ENST00000539599 TBCAO75347 108 aaKnown RBP15.39■□□□□ 0.05
UBE3B-210ENST00000539599 ABCB4P21439 1286 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 ALKBH5Q6P6C2 394 aaKnown RBP15.39■□□□□ 0.05
UBE3B-210ENST00000539599 TMEM179Q6ZVK1 233 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 PALB2Q86YC2 1186 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 ZSWIM2Q8NEG5 633 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 U2AF1L4Q8WU68 220 aaKnown RBP15.39■□□□□ 0.05
UBE3B-210ENST00000539599 DDX47Q9H0S4 455 aaKnown RBP15.39■□□□□ 0.05
UBE3B-210ENST00000539599 PCDHGC5Q9Y5F6 944 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 IGLV3-22A0A075B6J6 115 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 TMEM150BA6NC51 233 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 VGLL3A8MV65 326 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 SLITRK3O94933 977 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 GNA14O95837 355 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 PDCLQ13371 301 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 QSER1Q2KHR3 1735 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 CBWD6Q4V339 395 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 CBWD3Q5JTY5 395 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 CBWD5Q5RIA9 395 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 MASTLQ96GX5 879 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 TRAF3IP3Q9Y228 551 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 IGSF9BQ9UPX0 1349 aa15.39■□□□□ 0.05
UBE3B-210ENST00000539599 ARP10275 920 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 ALDH1B1P30837 517 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 EPHB4P54760 987 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 AP3B2Q13367 1082 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 EDRF1Q3B7T1 1238 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 Q4G0T1 1027 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 PODNQ7Z5L7 613 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 ZC3H3Q8IXZ2 948 aaKnown RBP15.38■□□□□ 0.05
UBE3B-210ENST00000539599 RNF10Q8N5U6 811 aaKnown RBP15.38■□□□□ 0.05
UBE3B-210ENST00000539599 ERMNQ8TAM6 284 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 EDEM3Q9BZQ6 932 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 TMX4Q9H1E5 349 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-210ENST00000539599 NEUROG2Q9H2A3 272 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 TMEM51Q9NW97 253 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 SAMM50Q9Y512 469 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 YDJCA8MPS7 323 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 DDX3XO00571 662 aaKnown RBP eCLIP15.38■□□□□ 0.051e-7■■■□□ 18.1
UBE3B-210ENST00000539599 RBM26Q5T8P6 1007 aaKnown RBP15.38■□□□□ 0.05
UBE3B-210ENST00000539599 GLYCTKQ8IVS8 523 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 LRRC4CQ9HCJ2 640 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 TAS2R14Q9NYV8 317 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 ZBTB12Q9Y330 459 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-210ENST00000539599 PITPNM2Q9BZ72 1349 aa15.38■□□□□ 0.05
UBE3B-210ENST00000539599 ZNF233A6NK53 670 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 CCT5P48643 541 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 ERVK-9P63128 1117 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 ARHGAP44Q17R89 818 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 LRCH2Q5VUJ6 765 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 LNX1Q8TBB1 728 aaPredicted RBP15.37■□□□□ 0.05
UBE3B-210ENST00000539599 PIK3R5Q8WYR1 880 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 SYN2Q92777 582 aaPredicted RBP15.37■□□□□ 0.05
UBE3B-210ENST00000539599 IDI2Q9BXS1 227 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 CELF4Q9BZC1 486 aaKnown RBP15.37■□□□□ 0.05
UBE3B-210ENST00000539599 CENPHQ9H3R5 247 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 SEPT11Q9NVA2 429 aaKnown RBP15.37■□□□□ 0.05
UBE3B-210ENST00000539599 ZBTB21Q9ULJ3 1066 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 NR2E1Q9Y466 385 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 SPATA31A6Q5VVP1 1343 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 FAM13AO94988 1023 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 FLT3P36888 993 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 IRAK1P51617 712 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 GNGT1P63211 74 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 RPS6KA1Q15418 735 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 OTOP1Q7RTM1 612 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 METTL13Q8N6R0 699 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 USP38Q8NB14 1042 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 PCIF1Q9H4Z3 704 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 SLX4Q8IY92 1834 aa15.37■□□□□ 0.05
UBE3B-210ENST00000539599 HLTFQ14527 1009 aaKnown RBP eCLIP15.36■□□□□ 0.05
UBE3B-210ENST00000539599 STRIP1Q5VSL9 837 aa15.36■□□□□ 0.05
UBE3B-210ENST00000539599 FRMD5Q7Z6J6 570 aa15.36■□□□□ 0.05
UBE3B-210ENST00000539599 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.36■□□□□ 0.05
UBE3B-210ENST00000539599 TYW1Q9NV66 732 aaKnown RBP15.36■□□□□ 0.05
UBE3B-210ENST00000539599 CALUO43852 315 aaPredicted RBP15.36■□□□□ 0.05
UBE3B-210ENST00000539599 RAD17O75943 681 aa15.36■□□□□ 0.05
UBE3B-210ENST00000539599 KIF4AO95239 1232 aa15.36■□□□□ 0.05
UBE3B-210ENST00000539599 EPB41P11171 864 aaKnown RBP15.36■□□□□ 0.05
UBE3B-210ENST00000539599 AADACL2Q6P093 401 aa15.36■□□□□ 0.05
UBE3B-210ENST00000539599 NLGN1Q8N2Q7 840 aa15.36■□□□□ 0.05
UBE3B-210ENST00000539599 OLIG1Q8TAK6 271 aa15.36■□□□□ 0.05
UBE3B-210ENST00000539599 TRIM31Q9BZY9 425 aa15.36■□□□□ 0.05
UBE3B-210ENST00000539599 GDF3Q9NR23 364 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms