RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 FAM228BP0C875 321 aa13.75□□□□□ -0.21
SFSWAP-208ENST00000539506 PRLRP16471 622 aa13.75□□□□□ -0.21
SFSWAP-208ENST00000539506 UHMK1Q8TAS1 419 aaKnown RBP13.75□□□□□ -0.21
SFSWAP-208ENST00000539506 EDEM3Q9BZQ6 932 aa13.75□□□□□ -0.21
SFSWAP-208ENST00000539506 CXorf56Q9H5V9 222 aa13.75□□□□□ -0.21
SFSWAP-208ENST00000539506 EML1O00423 815 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 KCNK3O14649 394 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 MYBP10242 640 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 COPB2P35606 906 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 CYP4A11Q02928 519 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 KCNH2Q12809 1159 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 QPCTQ16769 361 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 KIAA1755Q5JYT7 1200 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 SFMBT2Q5VUG0 894 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 PODNQ7Z5L7 613 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 FAM133AQ8N9E0 248 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 NOX5Q96PH1 765 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 MSH4O15457 936 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 MEFVO15553 781 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 CPP00450 1065 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 SLC9A1P19634 815 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 ALDH1B1P30837 517 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 KIAA0753Q2KHM9 967 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 SFR1Q86XK3 245 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 SPICE1Q8N0Z3 855 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 ZNF622Q969S3 477 aaKnown RBP eCLIP13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 VAV3Q9UKW4 847 aa13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-208ENST00000539506 SERPING1P05155 500 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 TCP1P17987 556 aaKnown RBP13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 NR2F2P24468 414 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 HSPA1LP34931 641 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 NBPF9Q3BBW0 867 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 Q4G0T1 1027 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 CFAP221Q4G0U5 840 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 EPM2AIP1Q7L775 607 aaPredicted RBP13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 KRT27Q7Z3Y8 459 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 IFT20Q8IY31 132 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 MDM1Q8TC05 714 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 UBLCP1Q8WVY7 318 aaPredicted RBP13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 MASTLQ96GX5 879 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 RUSC1Q9BVN2 902 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 TDRD3Q9H7E2 651 aaKnown RBP13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 AJAP1Q9UKB5 411 aaPredicted RBP13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 ZBTB39O15060 712 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 CEP104O60308 925 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 ECE2O60344 883 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 SLC9C1Q4G0N8 1177 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 CCDC91Q7Z6B0 441 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 NLRP14Q86W24 1093 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 SLFN12Q8IYM2 578 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 NLGN1Q8N2Q7 840 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 SYT2Q8N9I0 419 aaPredicted RBP13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 SYN2Q92777 582 aaPredicted RBP13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 AMNQ9BXJ7 453 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 DDX47Q9H0S4 455 aaKnown RBP13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 DPH5Q9H2P9 285 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 RGL1Q9NZL6 768 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 SFI1A8K8P3 1242 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 PHF20L1A8MW92 1017 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 TMCO5BA8MYB1 307 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 HGSO14964 777 aaPredicted RBP13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 GH2P01242 217 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 KRT18P05783 430 aaKnown RBP13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 RPA1P27694 616 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 SREBF1P36956 1147 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 TEX2Q8IWB9 1127 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 MYCBPAPQ8TBZ2 947 aa13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 GEMIN8Q9NWZ8 242 aaKnown RBP13.73□□□□□ -0.21
SFSWAP-208ENST00000539506 BRWD3Q6RI45 1802 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 ZNF646O15015 1829 aaPredicted RBP13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 PITPNM2Q9BZ72 1349 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 PPP1R37O75864 691 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 AKAP3O75969 853 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 RPSAP08865 295 aaKnown RBP13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 CASP4P49662 377 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 AP3B2Q13367 1082 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 ABCB5Q2M3G0 1257 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 STRIP1Q5VSL9 837 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 EMBQ6PCB8 327 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 MOXD1Q6UVY6 613 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 IRF2BP2Q7Z5L9 587 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 FBXO11Q86XK2 927 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 SUGP1Q8IWZ8 645 aaKnown RBP13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 IQCKQ8N0W5 287 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 CCDC114Q96M63 670 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 NEUROG2Q9H2A3 272 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 AIPL1Q9NZN9 384 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 GGT7Q9UJ14 662 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 ECE1P42892 770 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 FNTAP49354 379 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 MMP14P50281 582 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 LLGL1Q15334 1064 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 NAB2Q15742 525 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 SLC18A3Q16572 532 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 PTGISQ16647 500 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 TMEM179Q6ZVK1 233 aa13.72□□□□□ -0.21
SFSWAP-208ENST00000539506 GMCL1P1Q8NEA9 526 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms