RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-210	ENST00000539303	ZBTB21	Q9ULJ3	1066 aa		4.17	□□□□□ -1.74
SNHG1-210	ENST00000539303	NUB1	Q9Y5A7	615 aa		4.17	□□□□□ -1.74
SNHG1-210	ENST00000539303	OR14I1	A6ND48	311 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	TRIM75P	A6NK02	468 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	EIF5B	O60841	1220 aa	Known RBP	4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	PRPF6	O94906	941 aa	Known RBP	4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	ZBTB7A	O95365	584 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	MAP4K4	O95819	1239 aa	Predicted RBP	4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	ASGR2	P07307	311 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	C8B	P07358	591 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	CELA3B	P08861	270 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	C5AR1	P21730	350 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	ENPP1	P22413	925 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	FBLN1	P23142	703 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	HERVK_113	P62684	666 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	CCT2	P78371	535 aa	Known RBP	4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	SLC6A3	Q01959	620 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	FAP	Q12884	760 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	TRIM25	Q14258	630 aa	Known RBP	4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	NR1I3	Q14994	352 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	FAM102B	Q5T8I3	360 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	CCDC181	Q5TID7	509 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	ETV3L	Q6ZN32	361 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	CBLL1	Q75N03	491 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	ZNF605	Q86T29	641 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	AMIGO3	Q86WK7	504 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	PHYKPL	Q8IUZ5	450 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	LYSMD2	Q8IV50	215 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	ZZZ3	Q8IYH5	903 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	CMTR2	Q8IYT2	770 aa	Known RBP	4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	MAGEB6	Q8N7X4	407 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	LIN37	Q96GY3	246 aa	Predicted RBP	4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	LRGUK	Q96M69	825 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	TUBGCP5	Q96RT8	1024 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	ORAI2	Q96SN7	254 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	ANLN	Q9NQW6	1124 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	DNAJC28	Q9NX36	388 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	SPEF1	Q9Y4P9	236 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	ASB1	Q9Y576	335 aa		4.16	□□□□□ -1.74
SNHG1-210	ENST00000539303	ZNF503-AS2	A6NEH8	195 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	ZNF839	A8K0R7	811 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	PAPLN	O95428	1278 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	CT47B1	P0C2W7	299 aa	Predicted RBP	4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	PTGS1	P23219	599 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	MTNR1B	P49286	362 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	FXR1	P51114	621 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	YBX1	P67809	324 aa	Known RBP	4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	PFKP	Q01813	784 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	ALDH6A1	Q02252	535 aa	Known RBP	4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	SLC9A5	Q14940	896 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.15	□□□□□ -1.75	1e-323	■■■■■ 41.6
SNHG1-210	ENST00000539303	RTP5	Q14D33	572 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	FSCN1	Q16658	493 aa	Known RBP	4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	UGT8	Q16880	541 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	CD300LD	Q6UXZ3	194 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	ESPNL	Q6ZVH7	1005 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	KCNK18	Q7Z418	384 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	ZSWIM9	Q86XI8	627 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	AMOTL1	Q8IY63	956 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	TCEAL8	Q8IYN2	117 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	MAML3	Q96JK9	1138 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	ZSWIM3	Q96MP5	696 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	SLC6A17	Q9H1V8	727 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	ARHGAP28	Q9P2N2	729 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	SERPINB13	Q9UIV8	391 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	TUBD1	Q9UJT1	453 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	INVS	Q9Y283	1065 aa		4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.15	□□□□□ -1.75
SNHG1-210	ENST00000539303	MYOCOS	A0A1B0GUC4	107 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	CCDC194	A0A1B0GVG4	234 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	E2F8	A0AVK6	867 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	KLHL33	A6NCF5	533 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	PRC1	O43663	620 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	RFPL1	O75677	317 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	PCDH8	O95206	1070 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	IL33	O95760	270 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	IL18BP	O95998	194 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	CFB	P00751	764 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	GLI1	P08151	1106 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	MYB	P10242	640 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	ATF2	P15336	505 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	AGXT	P21549	392 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	GNAL	P38405	381 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	RECQL	P46063	649 aa	Predicted RBP	4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	GLRB	P48167	497 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	LGALS4	P56470	323 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	CDK17	Q00537	523 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	KCNMB1	Q16558	191 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	TTC38	Q5R3I4	469 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	TMEM240	Q5SV17	173 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	ARTN	Q5T4W7	220 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	NXN	Q6DKJ4	435 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	SLFN12L	Q6IEE8	588 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	TTLL7	Q6ZT98	887 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	CATIP	Q7Z7H3	387 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	ATG4D	Q86TL0	474 aa	Predicted RBP	4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	CCDC146	Q8IYE0	955 aa		4.14	□□□□□ -1.75
SNHG1-210	ENST00000539303	PPM1N	Q8N819	430 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms