RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 TRPC6Q9Y210 931 aa8.21□□□□□ -1.1
LMO3-220ENST00000539232 NFASCO94856 1347 aa8.21□□□□□ -1.1
LMO3-220ENST00000539232 MAP1BP46821 2468 aaKnown RBP8.2□□□□□ -1.1
LMO3-220ENST00000539232 MBLAC1A4D2B0 266 aaPredicted RBP8.2□□□□□ -1.1
LMO3-220ENST00000539232 PRR23AA6NEV1 266 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 C19orf67A6NJJ6 358 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 BTBD18B2RXH4 712 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 EML1O00423 815 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 CHMP2AO43633 222 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 STBD1O95210 358 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 CXCL10P02778 98 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 CA3P07451 260 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 ATP2A2P16615 1042 aaKnown RBP8.2□□□□□ -1.1
LMO3-220ENST00000539232 KCNA5P22460 613 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 GNA11P29992 359 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 RBM25P49756 843 aaKnown RBP8.2□□□□□ -1.1
LMO3-220ENST00000539232 ZP2Q05996 745 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 TMEM62Q0P6H9 643 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 GRB10Q13322 594 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 BFSP2Q13515 415 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 B3GNT9Q6UX72 402 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 PIK3AP1Q6ZUJ8 805 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 ASCL5Q7RTU5 278 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 SUGP1Q8IWZ8 645 aaKnown RBP8.2□□□□□ -1.1
LMO3-220ENST00000539232 DBF4BQ8NFT6 615 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 ETNPPLQ8TBG4 499 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 DNAJB3Q8WWF6 145 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 ARNTL2Q8WYA1 636 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 HAS1Q92839 578 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 SLC5A5Q92911 643 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 PBXIP1Q96AQ6 731 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 MBOAT7Q96N66 472 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 SH2D3AQ9BRG2 576 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 ZNF577Q9BSK1 485 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 KATNAL1Q9BW62 490 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 EHMT1Q9H9B1 1298 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 AGO3Q9H9G7 860 aaKnown RBP8.2□□□□□ -1.1
LMO3-220ENST00000539232 WRAP73Q9P2S5 460 aaPredicted RBP8.2□□□□□ -1.1
LMO3-220ENST00000539232 STK36Q9NRP7 1315 aa8.2□□□□□ -1.1
LMO3-220ENST00000539232 FAM208BQ5VWN6 2430 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 COL4A6Q14031 1691 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 CYP3A7-CYP3A51PA0A087WV96 503 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 A0A087WWV3 80 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.19□□□□□ -1.1
LMO3-220ENST00000539232 RSPH10B2B2RC85 870 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 BACH1O14867 736 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 MAFGO15525 162 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 LPXNO60711 386 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 PSMD10O75832 226 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 RSPH10BP0C881 870 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 CYP3A7P24462 503 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 STAT5BP51692 787 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 WDR5P61964 334 aaKnown RBP8.19□□□□□ -1.1
LMO3-220ENST00000539232 MGAT3Q09327 533 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 LPIN1Q14693 890 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 LETM2Q2VYF4 491 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 HERC4Q5GLZ8 1057 aaPredicted RBP8.19□□□□□ -1.1
LMO3-220ENST00000539232 FAM117BQ6P1L5 589 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 PLPPR4Q7Z2D5 763 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 ZNF579Q8NAF0 562 aaKnown RBP8.19□□□□□ -1.1
LMO3-220ENST00000539232 GIMAP8Q8ND71 665 aaPredicted RBP8.19□□□□□ -1.1
LMO3-220ENST00000539232 CCDC148Q8NFR7 591 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 CAGE1Q8TC20 777 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 AFAP1L1Q8TED9 768 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 CCDC12Q8WUD4 166 aaPredicted RBP8.19□□□□□ -1.1
LMO3-220ENST00000539232 ZNF668Q96K58 619 aaPredicted RBP8.19□□□□□ -1.1
LMO3-220ENST00000539232 PPP1R16BQ96T49 567 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 SDF4Q9BRK5 362 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 GLT8D2Q9H1C3 349 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 SMARCAD1Q9H4L7 1026 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 ALG13Q9NP73 1137 aaKnown RBP8.19□□□□□ -1.1
LMO3-220ENST00000539232 ERAP1Q9NZ08 941 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 GABBR1Q9UBS5 961 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 LIMCH1Q9UPQ0 1083 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 FAM50BQ9Y247 325 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 EMSYQ7Z589 1322 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 SCN10AQ9Y5Y9 1956 aa8.19□□□□□ -1.1
LMO3-220ENST00000539232 COL4A4P53420 1690 aaPredicted RBP8.18□□□□□ -1.1
LMO3-220ENST00000539232 KIF28PB7ZC32 967 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 ZBTB39O15060 712 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 GHRP10912 638 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 KLRC1P26715 233 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 USP11P51784 963 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 TAP1Q03518 808 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 DRP2Q13474 957 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 ACAP1Q15027 740 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 NONOQ15233 471 aaKnown RBP eCLIP8.18□□□□□ -1.1
LMO3-220ENST00000539232 ANKRD1Q15327 319 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 Q4G0T1 1027 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 PDXDC2PQ6P474 469 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 CPLX2Q6PUV4 134 aaKnown RBP8.18□□□□□ -1.1
LMO3-220ENST00000539232 DGLUCYQ7Z3D6 616 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 RTN4RL1Q86UN2 441 aaPredicted RBP8.18□□□□□ -1.1
LMO3-220ENST00000539232 POTEDQ86YR6 584 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 HERC6Q8IVU3 1022 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 TEX2Q8IWB9 1127 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 ADHFE1Q8IWW8 467 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 RPUSD2Q8IZ73 545 aaKnown RBP8.18□□□□□ -1.1
LMO3-220ENST00000539232 KIAA0319LQ8IZA0 1049 aa8.18□□□□□ -1.1
LMO3-220ENST00000539232 FBXL6Q8N531 539 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms