RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 DHX9Q08211 1270 aaKnown RBP9.81□□□□□ -0.84
SNHG1-209ENST00000538654 PPP2R5EQ16537 467 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 KRT28Q7Z3Y7 464 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 DZIP3Q86Y13 1208 aaKnown RBP9.81□□□□□ -0.84
SNHG1-209ENST00000538654 DAGLBQ8NCG7 672 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 KIAA0895Q8NCT3 520 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 CNKSR1Q969H4 720 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 PGM2Q96G03 612 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 CALML4Q96GE6 196 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 IFT74Q96LB3 600 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 BRIP1Q9BX63 1249 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 RAB17Q9H0T7 212 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 KIF9Q9HAQ2 790 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 SLC39A2Q9NP94 309 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 LRP5O75197 1615 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 ATP8B3O60423 1300 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 FLT1P17948 1338 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 CCDC169A6NNP5 214 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 KRIT1O00522 736 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 ZPR1O75312 459 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 NQO1P15559 274 aaKnown RBP9.81□□□□□ -0.84
SNHG1-209ENST00000538654 FAM83BQ5T0W9 1011 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 MIS18BP1Q6P0N0 1132 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 TBC1D1Q86TI0 1168 aaPredicted RBP9.81□□□□□ -0.84
SNHG1-209ENST00000538654 APLFQ8IW19 511 aaPredicted RBP9.81□□□□□ -0.84
SNHG1-209ENST00000538654 TEX9Q8N6V9 391 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 MIGA1Q8NAN2 632 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 CERKQ8TCT0 537 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 TBC1D5Q92609 795 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 ZHX3Q9H4I2 956 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 COL18A1P39060 1754 aa9.81□□□□□ -0.84
SNHG1-209ENST00000538654 PDE8AO60658 829 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 NUDT17P0C025 328 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 CYP7A1P22680 504 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 MMP13P45452 471 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 PSMD2Q13200 908 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 UNC13DQ70J99 1090 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 SV2BQ7L1I2 683 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 TMC4Q7Z404 712 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 KIRREL3Q8IZU9 778 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 PAF1Q8N7H5 531 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 SENP7Q9BQF6 1050 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.8□□□□□ -0.844e-59■■■□□ 16.1
SNHG1-209ENST00000538654 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.8□□□□□ -0.84
SNHG1-209ENST00000538654 TMEM60Q9H2L4 133 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 AIPL1Q9NZN9 384 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 PACSIN2Q9UNF0 486 aaPredicted RBP9.8□□□□□ -0.84
SNHG1-209ENST00000538654 PCDH11XQ9BZA7 1347 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 PCDH11YQ9BZA8 1340 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 CCDC88AQ3V6T2 1871 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 IRS4O14654 1257 aaPredicted RBP9.8□□□□□ -0.84
SNHG1-209ENST00000538654 BACH1O14867 736 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 DAPK3O43293 454 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 FLOT1O75955 427 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 OR52Z1P0C646 297 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 CHN1P15882 459 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 NUBP1P53384 320 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 KLHL30Q0D2K2 578 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 SIM2Q14190 667 aaPredicted RBP9.8□□□□□ -0.84
SNHG1-209ENST00000538654 ASIC2Q16515 512 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 CCDC38Q502W7 563 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 DDX42Q86XP3 938 aaKnown RBP eCLIP9.8□□□□□ -0.847e-6■■■□□ 16.5
SNHG1-209ENST00000538654 SYCE1Q8N0S2 351 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 RNF217Q8TC41 542 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 AGAP11Q8TF27 550 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 FMO2Q99518 471 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 NEUROG2Q9H2A3 272 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 PTPRHQ9HD43 1115 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 ETAA1Q9NY74 926 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 CPSF2Q9P2I0 782 aaKnown RBP9.8□□□□□ -0.84
SNHG1-209ENST00000538654 STK17AQ9UEE5 414 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 NOC2LQ9Y3T9 749 aaKnown RBP9.8□□□□□ -0.84
SNHG1-209ENST00000538654 BZW2Q9Y6E2 419 aaKnown RBP9.8□□□□□ -0.84
SNHG1-209ENST00000538654 ATAD5Q96QE3 1844 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 ANKRD36CQ5JPF3 1778 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 M0R2N6 131 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 DPYSL4O14531 572 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 SKAP2O75563 359 aaPredicted RBP9.8□□□□□ -0.84
SNHG1-209ENST00000538654 GNA14O95837 355 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 ANXA13P27216 316 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 GNAQP50148 359 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 PDE6CP51160 858 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 CCNG1P51959 295 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 LACTBP83111 547 aaPredicted RBP9.8□□□□□ -0.84
SNHG1-209ENST00000538654 BLMHQ13867 455 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 NLRP10Q86W26 655 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 RASGEF1CQ8N431 466 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 SDR42E1Q8WUS8 393 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 ATXN2LQ8WWM7 1075 aaKnown RBP9.8□□□□□ -0.84
SNHG1-209ENST00000538654 ORAI2Q96SN7 254 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 KCNMB3Q9NPA1 279 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 NLRC4Q9NPP4 1024 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 INTS9Q9NV88 658 aaKnown RBP9.8□□□□□ -0.84
SNHG1-209ENST00000538654 SLC5A4Q9NY91 659 aa9.8□□□□□ -0.84
SNHG1-209ENST00000538654 FAM205AQ6ZU69 1335 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 TNS2Q63HR2 1409 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 DCDC2CA8MYV0 355 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 TLR2O60603 784 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 SNUPNO95149 360 aaKnown RBP9.79□□□□□ -0.84
SNHG1-209ENST00000538654 AGTP01019 485 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms