RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ARHGEF37A1IGU5 675 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 EPHB1P54762 984 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 PDCLQ13371 301 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 LAMB3Q13751 1172 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 NAIF1Q69YI7 327 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-208ENST00000538570 PARVGQ9HBI0 331 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 SAMD9Q5K651 1589 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 MEIS1O00470 390 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 PITPNM3Q9BZ71 974 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 GPR108Q9NPR9 543 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 KLC4Q9NSK0 619 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 FNDC3AQ9Y2H6 1198 aaKnown RBP10.66□□□□□ -0.7
COL4A6-208ENST00000538570 PDE8BO95263 885 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 PAMP19021 973 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 MDM2Q00987 491 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-208ENST00000538570 CDC37Q16543 378 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-208ENST00000538570 SRLQ86TD4 932 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 TMEM60Q9H2L4 133 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 ABCF3Q9NUQ8 709 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 PLAAQ9Y263 795 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 TMA7Q9Y2S6 64 aaKnown RBP10.66□□□□□ -0.7
COL4A6-208ENST00000538570 WDR64B1ANS9 1081 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 PODXLO00592 558 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 ACSL3O95573 720 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 ARL13BQ3SXY8 428 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 TMEM259Q4ZIN3 620 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 ZBTB33Q86T24 672 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 DPP9Q86TI2 863 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 FAF2Q96CS3 445 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 ELAC2Q9BQ52 826 aaKnown RBP10.66□□□□□ -0.7
COL4A6-208ENST00000538570 TRIM55Q9BYV6 548 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 SUN2Q9UH99 717 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 USP14P54578 494 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 ALCAMQ13740 583 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 FSCBQ5H9T9 825 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 RHOT2Q8IXI1 618 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 CHAMP1Q96JM3 812 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 CDHR1Q96JP9 859 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 HEXIM2Q96MH2 286 aaKnown RBP10.65□□□□□ -0.7
COL4A6-208ENST00000538570 ADD3Q9UEY8 706 aaKnown RBP10.65□□□□□ -0.7
COL4A6-208ENST00000538570 LRFN2Q9ULH4 789 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 NFU1Q9UMS0 254 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 SRPRBQ9Y5M8 271 aaKnown RBP10.65□□□□□ -0.7
COL4A6-208ENST00000538570 TMEM247A6NEH6 219 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 ATP5HO75947 161 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 TJP3O95049 919 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 ADORA1P30542 326 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 CCNA1P78396 465 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 OLFML2BQ68BL8 750 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 SPICE1Q8N0Z3 855 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 OLFM3Q96PB7 478 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 GREM2Q9H772 168 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 DONSONQ9NYP3 566 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 RCOR1Q9UKL0 485 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 NBPF26B4DH59 902 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 GYG2O15488 501 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 PLA2G4BP0C869 781 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 CD58P19256 250 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 LRRC63Q05C16 580 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 ANGPTL8Q6UXH0 198 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 PPP4R3CPQ6ZMV5 832 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 RNF207Q6ZRF8 634 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 NBPF15Q8N660 670 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 MB21D1Q8N884 522 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 HSPH1Q92598 858 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 ZBTB10Q96DT7 871 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 PAGE5Q96GU1 130 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 AP5M1Q9H0R1 490 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 NDST4Q9H3R1 872 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 COPRSQ9NQ92 184 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 CCDC188H7C350 402 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 COPEO14579 308 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 KCNQ3O43525 872 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 KRT37O76014 449 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 PHKG2P15735 406 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 ANXA13P27216 316 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 TMPRSS15P98073 1019 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 SLFNL1Q499Z3 407 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 KRT39Q6A163 491 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 ARMCX2Q7L311 632 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 RNF139Q8WU17 664 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 NCLNQ969V3 563 aa10.65□□□□□ -0.7
COL4A6-208ENST00000538570 GPR101Q96P66 508 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-208ENST00000538570 TRPC5Q9UL62 973 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-208ENST00000538570 MAP3K15Q6ZN16 1313 aa10.65□□□□□ -0.71
COL4A6-208ENST00000538570 A0A0G2JND7 137 aa10.65□□□□□ -0.71
COL4A6-208ENST00000538570 MMEP08473 750 aa10.65□□□□□ -0.71
COL4A6-208ENST00000538570 IFNA8P32881 189 aa10.65□□□□□ -0.71
COL4A6-208ENST00000538570 DDIT3P35638 169 aa10.65□□□□□ -0.71
COL4A6-208ENST00000538570 HDLBPQ00341 1268 aaKnown RBP10.65□□□□□ -0.71
COL4A6-208ENST00000538570 SULF1Q8IWU6 871 aa10.65□□□□□ -0.71
COL4A6-208ENST00000538570 EXT2Q93063 718 aa10.65□□□□□ -0.71
COL4A6-208ENST00000538570 VPS39Q96JC1 886 aa10.65□□□□□ -0.71
COL4A6-208ENST00000538570 PIGSQ96S52 555 aa10.65□□□□□ -0.71
COL4A6-208ENST00000538570 KLC2Q9H0B6 622 aa10.65□□□□□ -0.71
COL4A6-208ENST00000538570 ZWILCHQ9H900 591 aa10.65□□□□□ -0.71
COL4A6-208ENST00000538570 ZSCAN20P17040 1043 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-208ENST00000538570 OSBPP22059 807 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 TLK2Q86UE8 772 aa10.64□□□□□ -0.71
COL4A6-208ENST00000538570 FAM96AQ9H5X1 160 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms