RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 PDIA5Q14554 519 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 SGSM1Q2NKQ1 1148 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 COBLL1Q53SF7 1204 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 OTUD7BQ6GQQ9 843 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 SLC30A9Q6PML9 568 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 APOA5Q6Q788 366 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 BZW1Q7L1Q6 419 aaKnown RBP7.35□□□□□ -1.23
USP28-207ENST00000538475 SESTD1Q86VW0 696 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 CCDC197Q8NCU1 140 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 MICAL1Q8TDZ2 1067 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 APPBP2Q92624 585 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 HVCN1Q96D96 273 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 SPDL1Q96EA4 605 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 IFT43Q96FT9 208 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 BICD1Q96G01 975 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 MYO19Q96H55 970 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 DHTKD1Q96HY7 919 aaPredicted RBP7.35□□□□□ -1.23
USP28-207ENST00000538475 IFT74Q96LB3 600 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 ERGIC2Q96RQ1 377 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 MKNK1Q9BUB5 465 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 NSRP1Q9H0G5 558 aaKnown RBP7.35□□□□□ -1.23
USP28-207ENST00000538475 ISCUQ9H1K1 167 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 CENPHQ9H3R5 247 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 SH2D4AQ9H788 454 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 CNNM2Q9H8M5 875 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 MAGEF1Q9HAY2 307 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 MAGEC2Q9UBF1 373 aaPredicted RBP7.35□□□□□ -1.23
USP28-207ENST00000538475 DMGDHQ9UI17 866 aaKnown RBP7.35□□□□□ -1.23
USP28-207ENST00000538475 SLC12A4Q9UP95 1085 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.35□□□□□ -1.23
USP28-207ENST00000538475 RIPOR2Q9Y4F9 1068 aa7.35□□□□□ -1.23
USP28-207ENST00000538475 BCORQ6W2J9 1755 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 SSU72P8A0A1W2PR75 194 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 BICDL2A1A5D9 508 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 DNM1LO00429 736 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 MPHOSPH10O00566 681 aaKnown RBP7.34□□□□□ -1.23
USP28-207ENST00000538475 GNB5O14775 395 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 TRIM37O94972 964 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 RTN3O95197 1032 aaPredicted RBP7.34□□□□□ -1.23
USP28-207ENST00000538475 NPTXRO95502 500 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 MYBP10242 640 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 KIF5BP33176 963 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 PDE6BP35913 854 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 SKIV2L2P42285 1042 aaKnown RBP7.34□□□□□ -1.23
USP28-207ENST00000538475 ARSDP51689 593 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 INHBEP58166 350 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 ANTXR2P58335 489 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 CCINQ13939 588 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 CLUL1Q15846 466 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 OCLNQ16625 522 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 WDR59Q6PJI9 974 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 MAATS1Q7Z4T9 603 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 CCDC63Q8NA47 563 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 NSMCE1Q8WV22 266 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 ZNF512BQ96KM6 892 aaPredicted RBP7.34□□□□□ -1.23
USP28-207ENST00000538475 CCDC43Q96MW1 224 aaKnown RBP7.34□□□□□ -1.23
USP28-207ENST00000538475 GDAP1L1Q96MZ0 367 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 SCLT1Q96NL6 688 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 CHP1Q99653 195 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 DBNDD2Q9BQY9 259 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 CCDC28BQ9BUN5 200 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 UBE2OQ9C0C9 1292 aaKnown RBP7.34□□□□□ -1.23
USP28-207ENST00000538475 TTYH3Q9C0H2 523 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.34□□□□□ -1.23
USP28-207ENST00000538475 STMN4Q9H169 189 aaPredicted RBP7.34□□□□□ -1.23
USP28-207ENST00000538475 EHD4Q9H223 541 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 NDST4Q9H3R1 872 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 CXXC1Q9P0U4 656 aaPredicted RBP7.34□□□□□ -1.23
USP28-207ENST00000538475 HDAC6Q9UBN7 1215 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 PLAGL2Q9UPG8 496 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 LEMD3Q9Y2U8 911 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 ARAP2Q8WZ64 1704 aa7.34□□□□□ -1.23
USP28-207ENST00000538475 PKD1L3Q7Z443 1732 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 A0A0U1RQJ8 604 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 ADARB2-AS1A8MUL3 147 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 BTNL10A8MVZ5 291 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 CCDC188H7C350 402 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 ENC1O14682 589 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 PSMA7O14818 248 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 FOXN1O15353 648 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 PRPF3O43395 683 aaKnown RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 PTCD1O75127 700 aaKnown RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 ATP5HO75947 161 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 ANP32DO95626 131 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 FGAP02671 866 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 IGKV5-2P06315 115 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 PARP1P09874 1014 aaKnown RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 IFIT1P09914 478 aaKnown RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 PDHBP11177 359 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 GBP1P32455 592 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 ADH7P40394 386 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 DGKGP49619 791 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 TOB1P50616 345 aaPredicted RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 GUCY1A3Q02108 690 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 C2orf54Q08AI8 447 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 COX20Q5RI15 118 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 C10orf76Q5T2E6 689 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 ERMARDQ5T6L9 678 aa7.33□□□□□ -1.24
USP28-207ENST00000538475 ARL6IP4Q66PJ3 421 aaKnown RBP7.33□□□□□ -1.24
USP28-207ENST00000538475 CWF19L1Q69YN2 538 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 297.5 ms