RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 PDXDC2PQ6P474 469 aa9.81□□□□□ -0.84
DDB1-212ENST00000538470 FAM177A1Q8N128 213 aaPredicted RBP9.81□□□□□ -0.84
DDB1-212ENST00000538470 ZNF710Q8N1W2 664 aa9.81□□□□□ -0.84
DDB1-212ENST00000538470 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.81□□□□□ -0.84
DDB1-212ENST00000538470 TRAPPC12Q8WVT3 735 aa9.81□□□□□ -0.84
DDB1-212ENST00000538470 BBXQ8WY36 941 aaPredicted RBP9.81□□□□□ -0.84
DDB1-212ENST00000538470 PPP2R3CQ969Q6 453 aa9.81□□□□□ -0.84
DDB1-212ENST00000538470 FAM167AQ96KS9 214 aa9.81□□□□□ -0.84
DDB1-212ENST00000538470 ZNF577Q9BSK1 485 aa9.81□□□□□ -0.84
DDB1-212ENST00000538470 C22orf23Q9BZE7 217 aa9.81□□□□□ -0.84
DDB1-212ENST00000538470 SH3GLB2Q9NR46 395 aa9.81□□□□□ -0.84
DDB1-212ENST00000538470 C1orf112Q9NSG2 853 aa9.81□□□□□ -0.84
DDB1-212ENST00000538470 PADI3Q9ULW8 664 aa9.81□□□□□ -0.84
DDB1-212ENST00000538470 WDR64B1ANS9 1081 aa9.8□□□□□ -0.84
DDB1-212ENST00000538470 RBAK-RBAKDNI3L0D1 243 aa9.8□□□□□ -0.84
DDB1-212ENST00000538470 C22orf31O95567 290 aa9.8□□□□□ -0.84
DDB1-212ENST00000538470 PSAPP07602 524 aa9.8□□□□□ -0.84
DDB1-212ENST00000538470 SARSP49591 514 aaKnown RBP9.8□□□□□ -0.84
DDB1-212ENST00000538470 TMEM62Q0P6H9 643 aa9.8□□□□□ -0.84
DDB1-212ENST00000538470 NTRK3Q16288 839 aa9.8□□□□□ -0.84
DDB1-212ENST00000538470 PRR16Q569H4 304 aa9.8□□□□□ -0.84
DDB1-212ENST00000538470 FAM178BQ8IXR5 827 aa9.8□□□□□ -0.84
DDB1-212ENST00000538470 CRIPAKQ8N1N5 446 aa9.8□□□□□ -0.84
DDB1-212ENST00000538470 ZBTB10Q96DT7 871 aa9.8□□□□□ -0.84
DDB1-212ENST00000538470 CCDC136Q96JN2 1154 aa9.8□□□□□ -0.84
DDB1-212ENST00000538470 ERVK-5Q9HDB9 667 aa9.8□□□□□ -0.84
DDB1-212ENST00000538470 MAFBQ9Y5Q3 323 aaPredicted RBP9.8□□□□□ -0.84
DDB1-212ENST00000538470 MRPL42Q9Y6G3 142 aaKnown RBP9.8□□□□□ -0.84
DDB1-212ENST00000538470 FSD2A1L4K1 749 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 GRXCR2A6NFK2 248 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 ZBTB42B2RXF5 422 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 GPR182O15218 404 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 GRM6O15303 877 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 MAGEB2O15479 319 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 RPS6KA5O75582 802 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 IL9P15248 144 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 CRYBB1P53674 252 aaPredicted RBP9.79□□□□□ -0.84
DDB1-212ENST00000538470 CTC1Q2NKJ3 1217 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 SWSAP1Q6NVH7 229 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 RTN4RL1Q86UN2 441 aaPredicted RBP9.79□□□□□ -0.84
DDB1-212ENST00000538470 CKAP2LQ8IYA6 745 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 TRIM22Q8IYM9 498 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 KIAA0319LQ8IZA0 1049 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 PHKBQ93100 1093 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 LENG9Q96B70 501 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 SLC26A6Q9BXS9 759 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 PRKAG3Q9UGI9 489 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 LRFN2Q9ULH4 789 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 PCDHA10Q9Y5I2 948 aa9.79□□□□□ -0.84
DDB1-212ENST00000538470 DENND3A2RUS2 1198 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 PI4K2BG5E9Z4 385 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 H3BQ06 376 aaPredicted RBP9.78□□□□□ -0.84
DDB1-212ENST00000538470 OATP04181 439 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 ATP4AP20648 1035 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 PDIA3P30101 505 aaKnown RBP9.78□□□□□ -0.84
DDB1-212ENST00000538470 SFNP31947 248 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 USP11P51784 963 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 JAK3P52333 1124 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 UBE3AQ05086 875 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 NFX1Q12986 1120 aaKnown RBP9.78□□□□□ -0.84
DDB1-212ENST00000538470 CSPP1Q1MSJ5 1256 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 TMEM31Q5JXX7 168 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 GALNT17Q6IS24 598 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 CPLX2Q6PUV4 134 aaKnown RBP9.78□□□□□ -0.84
DDB1-212ENST00000538470 MOXD1Q6UVY6 613 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 SLC24A5Q71RS6 500 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 RUFY3Q7L099 469 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 GJD3Q8N144 294 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 DAGLBQ8NCG7 672 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 RDM1Q8NG50 284 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 RASGRP4Q8TDF6 673 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 TMEM40Q8WWA1 233 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 MAP7D2Q96T17 732 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 POP1Q99575 1024 aaKnown RBP9.78□□□□□ -0.84
DDB1-212ENST00000538470 RIT2Q99578 217 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 TEKT3Q9BXF9 490 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 TM6SF1Q9BZW5 370 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 TMX1Q9H3N1 280 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 RGS18Q9NS28 235 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 CLDND1Q9NY35 253 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 VPS54Q9P1Q0 977 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 GABBR1Q9UBS5 961 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 PLAGL2Q9UPG8 496 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 GINS2Q9Y248 185 aa9.78□□□□□ -0.84
DDB1-212ENST00000538470 NOC2LQ9Y3T9 749 aaKnown RBP9.78□□□□□ -0.84
DDB1-212ENST00000538470 ARIH1Q9Y4X5 557 aaPredicted RBP9.78□□□□□ -0.84
DDB1-212ENST00000538470 ARID2Q68CP9 1835 aa9.77□□□□□ -0.84
DDB1-212ENST00000538470 C9IYK1 514 aa9.77□□□□□ -0.85
DDB1-212ENST00000538470 CPLX1O14810 134 aa9.77□□□□□ -0.85
DDB1-212ENST00000538470 ADAMTS3O15072 1205 aa9.77□□□□□ -0.85
DDB1-212ENST00000538470 HOXA2O43364 376 aa9.77□□□□□ -0.85
DDB1-212ENST00000538470 GAS7O60861 476 aa9.77□□□□□ -0.85
DDB1-212ENST00000538470 GPR37L1O60883 481 aa9.77□□□□□ -0.85
DDB1-212ENST00000538470 GPR32O75388 356 aa9.77□□□□□ -0.85
DDB1-212ENST00000538470 DEXIO95424 95 aa9.77□□□□□ -0.85
DDB1-212ENST00000538470 TMOD1P28289 359 aa9.77□□□□□ -0.85
DDB1-212ENST00000538470 SSTR3P32745 418 aaPredicted RBP9.77□□□□□ -0.85
DDB1-212ENST00000538470 NLRP5P59047 1200 aa9.77□□□□□ -0.85
DDB1-212ENST00000538470 CCT2P78371 535 aaKnown RBP9.77□□□□□ -0.85
DDB1-212ENST00000538470 PRKCEQ02156 737 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms