RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 CCDC70Q6NSX1 233 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 EP400NLQ6ZTU2 488 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 CEP68Q76N32 757 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 CAMKK1Q8N5S9 505 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 POF1BQ8WVV4 589 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 ATXN2LQ8WWM7 1075 aaKnown RBP10.84□□□□□ -0.67
CD9-207ENST00000538418 DPF3Q92784 378 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 PGBD4Q96DM1 585 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 C1GALT1C1Q96EU7 318 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 MVB12AQ96EY5 273 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 SGCZQ96LD1 299 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 SELENOOQ9BVL4 669 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 CDADC1Q9BWV3 514 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 FOXP3Q9BZS1 431 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 QRSL1Q9H0R6 528 aaKnown RBP10.84□□□□□ -0.67
CD9-207ENST00000538418 TMEM60Q9H2L4 133 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 SMOC1Q9H4F8 434 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 KCNG1Q9UIX4 513 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 MSRAQ9UJ68 235 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 B3GALT1Q9Y5Z6 326 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 KIAA1107Q9UPP5 1409 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 ERBB4Q15303 1308 aa10.84□□□□□ -0.67
CD9-207ENST00000538418 IGF2BP3O00425 579 aaKnown RBP eCLIP10.83□□□□□ -0.68
CD9-207ENST00000538418 MAN2B1O00754 1011 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 BMP3P12645 472 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 FXR1P51114 621 aaKnown RBP eCLIP10.83□□□□□ -0.68
CD9-207ENST00000538418 KIF23Q02241 960 aaPredicted RBP10.83□□□□□ -0.68
CD9-207ENST00000538418 SEMA5AQ13591 1074 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 SLC9A5Q14940 896 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 NFKBIBQ15653 356 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 CPZQ66K79 652 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 CC2D1AQ6P1N0 951 aaPredicted RBP10.83□□□□□ -0.68
CD9-207ENST00000538418 CYP2R1Q6VVX0 501 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 USP45Q70EL2 814 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 OTOP3Q7RTS5 596 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 TSPYL5Q86VY4 417 aaPredicted RBP10.83□□□□□ -0.68
CD9-207ENST00000538418 DLG3Q92796 817 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 TRMT2BQ96GJ1 504 aaKnown RBP10.83□□□□□ -0.68
CD9-207ENST00000538418 ZNF496Q96IT1 587 aaPredicted RBP10.83□□□□□ -0.68
CD9-207ENST00000538418 CCDC138Q96M89 665 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 RSAD1Q9HA92 442 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 TRMT13Q9NUP7 481 aaKnown RBP10.83□□□□□ -0.68
CD9-207ENST00000538418 BTG4Q9NY30 223 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 MAP3K20Q9NYL2 800 aaKnown RBP10.83□□□□□ -0.68
CD9-207ENST00000538418 USP36Q9P275 1121 aaKnown RBP10.83□□□□□ -0.68
CD9-207ENST00000538418 ZNF69Q9UC07 566 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 SWAP70Q9UH65 585 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 SERPINB13Q9UIV8 391 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 PCDHGB6Q9Y5F9 930 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 PTPRTO14522 1441 aa10.83□□□□□ -0.68
CD9-207ENST00000538418 SPAG9O60271 1321 aaKnown RBP10.83□□□□□ -0.68
CD9-207ENST00000538418 H3BML4 177 aa10.82□□□□□ -0.68
CD9-207ENST00000538418 NKRFO15226 690 aaKnown RBP eCLIP10.82□□□□□ -0.68
CD9-207ENST00000538418 PDCP20941 246 aa10.82□□□□□ -0.68
CD9-207ENST00000538418 ENDOUP21128 410 aaKnown RBP10.82□□□□□ -0.68
CD9-207ENST00000538418 UVSSAQ2YD98 709 aa10.82□□□□□ -0.68
CD9-207ENST00000538418 PCGF5Q86SE9 256 aa10.82□□□□□ -0.68
CD9-207ENST00000538418 MYLK4Q86YV6 388 aaPredicted RBP10.82□□□□□ -0.68
CD9-207ENST00000538418 DENND1CQ8IV53 801 aa10.82□□□□□ -0.68
CD9-207ENST00000538418 NAT16Q8N8M0 369 aa10.82□□□□□ -0.68
CD9-207ENST00000538418 SH3RF2Q8TEC5 729 aa10.82□□□□□ -0.68
CD9-207ENST00000538418 RTF1Q92541 710 aaKnown RBP10.82□□□□□ -0.68
CD9-207ENST00000538418 SLC2A13Q96QE2 648 aa10.82□□□□□ -0.68
CD9-207ENST00000538418 CFDP1Q9UEE9 299 aaPredicted RBP10.82□□□□□ -0.68
CD9-207ENST00000538418 TUBD1Q9UJT1 453 aa10.82□□□□□ -0.68
CD9-207ENST00000538418 PLEKHH2Q8IVE3 1493 aa10.81□□□□□ -0.68
CD9-207ENST00000538418 FKTNO75072 461 aa10.81□□□□□ -0.68
CD9-207ENST00000538418 CLASP2O75122 1294 aaKnown RBP10.81□□□□□ -0.68
CD9-207ENST00000538418 MOGSQ13724 837 aa10.81□□□□□ -0.68
CD9-207ENST00000538418 UAP1L1Q3KQV9 507 aa10.81□□□□□ -0.68
CD9-207ENST00000538418 CT83Q5H943 113 aa10.81□□□□□ -0.68
CD9-207ENST00000538418 FIGNQ5HY92 759 aa10.81□□□□□ -0.68
CD9-207ENST00000538418 DARS2Q6PI48 645 aaKnown RBP10.81□□□□□ -0.68
CD9-207ENST00000538418 PAOXQ6QHF9 649 aa10.81□□□□□ -0.68
CD9-207ENST00000538418 LINC00114Q6XXX2 140 aa10.81□□□□□ -0.68
CD9-207ENST00000538418 KCNK18Q7Z418 384 aa10.81□□□□□ -0.68
CD9-207ENST00000538418 TEX19Q8NA77 164 aa10.81□□□□□ -0.68
CD9-207ENST00000538418 SRPK3Q9UPE1 567 aa10.81□□□□□ -0.68
CD9-207ENST00000538418 LAS1LQ9Y4W2 734 aaKnown RBP10.81□□□□□ -0.68
CD9-207ENST00000538418 NPATQ14207 1427 aa10.81□□□□□ -0.68
CD9-207ENST00000538418 FYCO1Q9BQS8 1478 aa10.81□□□□□ -0.68
CD9-207ENST00000538418 FER1L4A9Z1Z3 1794 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 GNAT3A8MTJ3 354 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 IFIT5Q13325 482 aaKnown RBP10.8□□□□□ -0.68
CD9-207ENST00000538418 GRIK4Q16099 956 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 UGT8Q16880 541 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 RNF111Q6ZNA4 994 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 CXorf67Q86X51 503 aaPredicted RBP10.8□□□□□ -0.68
CD9-207ENST00000538418 KIAA0319LQ8IZA0 1049 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 Q8N1Y9 231 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 PRR18Q8N4B5 295 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 NKAPQ8N5F7 415 aaKnown RBP10.8□□□□□ -0.68
CD9-207ENST00000538418 EAF2Q96CJ1 260 aaPredicted RBP10.8□□□□□ -0.68
CD9-207ENST00000538418 MYRFLQ96LU7 910 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 TBCBQ99426 244 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 EPB41L1Q9H4G0 881 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 USP21Q9UK80 565 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 EDARQ9UNE0 448 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 POLHQ9Y253 713 aa10.8□□□□□ -0.68
CD9-207ENST00000538418 ZMYM3Q14202 1370 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms