RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 ANKK1Q8NFD2 765 aa11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 LINC01599Q8WXQ3 324 aa11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 MRPS27Q92552 414 aaKnown RBP11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 EHMT1Q9H9B1 1298 aa11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 PRMT8Q9NR22 394 aaPredicted RBP11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 RAI2Q9Y5P3 530 aa11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 CELSR3Q9NYQ7 3312 aa11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 KALRNO60229 2985 aa11.28□□□□□ -0.6
PRKAB1-204ENST00000538271 FNDC1Q4ZHG4 1894 aaPredicted RBP11.27□□□□□ -0.6
PRKAB1-204ENST00000538271 CYP2D7A0A087X1C5 515 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 KANSL1LA0AUZ9 987 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 BMP3P12645 472 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 MAGEA9P43362 315 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 STAT2P52630 851 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 SNAP25P60880 206 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 PTPN14Q15678 1187 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 TMED8Q6PL24 325 aaPredicted RBP11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 TMC5Q6UXY8 1006 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 TMEFF1Q8IYR6 380 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 SHDQ96IW2 340 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 ZNF512BQ96KM6 892 aaPredicted RBP11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 MPHOSPH6Q99547 160 aaKnown RBP11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 DZANK1Q9NVP4 752 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 CLIP2Q9UDT6 1046 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 PUF60Q9UHX1 559 aaKnown RBP11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 MTF2Q9Y483 593 aaPredicted RBP11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 DOCK8Q8NF50 2099 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 KIAA1217Q5T5P2 1943 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 LOXHD1Q8IVV2 1947 aa11.27□□□□□ -0.61
PRKAB1-204ENST00000538271 PTPDC1A2A3K4 754 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 N4BP1O75113 896 aaKnown RBP11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 C1QL1O75973 258 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 KRT38O76015 456 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 CHRNA1P02708 482 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 STAG3L1P0CL83 205 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 CD46P15529 392 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 PLCB3Q01970 1234 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 LPIN1Q14693 890 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 SF3A2Q15428 464 aaKnown RBP11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 C12orf60Q5U649 245 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 SLC30A10Q6XR72 485 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 RTN4RL1Q86UN2 441 aaPredicted RBP11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 COLGALT1Q8NBJ5 622 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 DBNDD2Q9BQY9 259 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 DDX23Q9BUQ8 820 aaKnown RBP11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 SLC2A4RGQ9NR83 387 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 CCPG1Q9ULG6 757 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 FRMPD2Q68DX3 1309 aaPredicted RBP11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 ACACAQ13085 2346 aa11.26□□□□□ -0.61
PRKAB1-204ENST00000538271 SHROOM3Q8TF72 1996 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 C2orf71A6NGG8 1288 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 DDX11L8A8MPP1 907 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 NFIBO00712 420 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 CALML3P27482 149 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 SIM2Q14190 667 aaPredicted RBP11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 UBXN2BQ14CS0 331 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 TMC7Q7Z402 723 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 GPR149Q86SP6 731 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 ZNF605Q86T29 641 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 FAM160B2Q86V87 743 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 MRPL43Q8N983 215 aaKnown RBP11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 C12orf50Q8NA57 414 aaPredicted RBP11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 PPTC7Q8NI37 304 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 CHURC1Q8WUH1 139 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 STAG1Q8WVM7 1258 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 NXPE3Q969Y0 559 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 EMID1Q96A84 441 aaPredicted RBP11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 PCGF6Q9BYE7 350 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 OSBPL6Q9BZF3 934 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 RNPEPQ9H4A4 650 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 NEUROG3Q9Y4Z2 214 aa11.25□□□□□ -0.61
PRKAB1-204ENST00000538271 TEX15Q9BXT5 2789 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 DOPEY1Q5JWR5 2465 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 FAM170BA6NMN3 283 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 CAPNS1P04632 268 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 SMIM10L2AP0DMW4 78 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 SMIM10L2BP0DMW5 78 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 TDGF1P13385 188 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 NRLP54845 237 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 TROAPQ12815 778 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 IKQ13123 557 aaPredicted RBP11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 LETM2Q2VYF4 491 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 SLFN13Q68D06 897 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 SEPT14Q6ZU15 432 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 GMCL1P1Q8NEA9 526 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 DNERQ8NFT8 737 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 MKL1Q969V6 931 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 ANTXR1Q9H6X2 564 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 SEPT9Q9UHD8 586 aaPredicted RBP11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 ISY1Q9ULR0 285 aaKnown RBP11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 MSRB2Q9Y3D2 182 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 MYO9AB2RTY4 2548 aa11.24□□□□□ -0.61
PRKAB1-204ENST00000538271 PPFIA4O75335 1185 aa11.23□□□□□ -0.61
PRKAB1-204ENST00000538271 EPCAMP16422 314 aa11.23□□□□□ -0.61
PRKAB1-204ENST00000538271 SRSF1Q07955 248 aaKnown RBP eCLIP11.23□□□□□ -0.61
PRKAB1-204ENST00000538271 LAMC2Q13753 1193 aa11.23□□□□□ -0.61
PRKAB1-204ENST00000538271 SMC1AQ14683 1233 aaKnown RBP11.23□□□□□ -0.61
PRKAB1-204ENST00000538271 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms