RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 ANKRD33Q7Z3H0 272 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 FBXO16Q8IX29 292 aaPredicted RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 CCDC65Q8IXS2 484 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 NECAB1Q8N987 351 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 PHOSPHO2Q8TCD6 241 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 MICAL1Q8TDZ2 1067 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 PSPC1Q8WXF1 523 aaKnown RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 IL25Q9H293 177 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 TUT1Q9H6E5 874 aaKnown RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 NCOA5Q9HCD5 579 aaKnown RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 CHST12Q9NRB3 414 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 ODF2LQ9ULJ1 636 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 SIPA1L1O43166 1804 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 CDK5RAP2Q96SN8 1893 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 ABHD14A-ACY1A0A1B0GW23 586 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 DDX11L8A8MPP1 907 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 KIAA0355O15063 1070 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 OATP04181 439 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 LGALS2P05162 132 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 MAPTP10636 758 aaKnown RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 SELPP16109 830 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 GTF2A1P52655 376 aaPredicted RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 POLGP54098 1239 aaPredicted RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 TPM4P67936 248 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 SNX17Q15036 470 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 PRPF38BQ5VTL8 546 aaKnown RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 TAPT1Q6NXT6 567 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 ZNF662Q6ZS27 426 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 AFG1LQ8WV93 481 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 FAM210AQ96ND0 272 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 MRPL9Q9BYD2 267 aaKnown RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 CCSER1Q9C0I3 900 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 TSPYL2Q9H2G4 693 aaPredicted RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 RTEL1Q9NZ71 1219 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 DPP7Q9UHL4 492 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 MSRAQ9UJ68 235 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 TSKSQ9UJT2 592 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 GNEQ9Y223 722 aaKnown RBP3.97□□□□□ -1.77
PTPN22-211ENST00000538253 SSX2IPQ9Y2D8 614 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 RIPK3Q9Y572 518 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 TRPV2Q9Y5S1 764 aa3.97□□□□□ -1.77
PTPN22-211ENST00000538253 UBE4BO95155 1302 aa3.96□□□□□ -1.77
PTPN22-211ENST00000538253 SYNRGQ9UMZ2 1314 aa3.96□□□□□ -1.77
PTPN22-211ENST00000538253 MYH4Q9Y623 1939 aa3.96□□□□□ -1.77
PTPN22-211ENST00000538253 A0A1W2PQ27 194 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 A0A1W2PQ64 194 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 A0A1W2PQD8 194 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 KLHL33A6NCF5 533 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SPTLC2O15270 562 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 ATG7O95352 703 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 F13A1P00488 732 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 AMHP03971 560 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SRGAP2BP0DMP2 458 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SMPD1P17405 629 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 RPA1P27694 616 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 TCF7P36402 384 aaPredicted RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 ADCYAP1R1P41586 468 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 CAP1Q01518 475 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 ARHGAP1Q07960 439 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 STRN3Q13033 797 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 KCNA10Q16322 511 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 UBE2SQ16763 222 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 RRAGBQ5VZM2 374 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 NCAPH2Q6IBW4 605 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SLFN12LQ6IEE8 588 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SLC39A5Q6ZMH5 540 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SV2BQ7L1I2 683 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 IFNLR1Q8IU57 520 aaPredicted RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SNX29Q8TEQ0 813 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SH3TC2Q8TF17 1288 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SPATA32Q96LK8 384 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 PRIMPOLQ96LW4 560 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SLC9A7Q96T83 725 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 KCNMB3Q9NPA1 279 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 PCDHA2Q9Y5H9 948 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 COL4A3BPQ9Y5P4 624 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 KINO60870 393 aaKnown RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 ADAMTS4O75173 837 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 FAM13AO94988 1023 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 EYA4O95677 639 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 ASGR1P07306 291 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 CALRP27797 417 aaKnown RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 ATP2C1P98194 919 aaPredicted RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 CREMQ03060 361 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 FPGSQ05932 587 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 PSMD2Q13200 908 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 ZFYVE27Q5T4F4 411 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 PDXDC1Q6P996 788 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 CYFIP1Q7L576 1253 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 CD302Q8IX05 232 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 ELOA2Q8IYF1 753 aaPredicted RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 ANKRD20A12PQ8NF67 263 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 GPR20Q99678 358 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 NIFKQ9BYG3 293 aaKnown RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 SENP6Q9GZR1 1112 aaPredicted RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 TSPYL1Q9H0U9 437 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 KIAA1586Q9HCI6 787 aa3.96□□□□□ -1.78
PTPN22-211ENST00000538253 PRMT7Q9NVM4 692 aaPredicted RBP3.96□□□□□ -1.78
PTPN22-211ENST00000538253 KANSL3Q9P2N6 904 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms